RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 PEX11GQ96HA9 241 aa6.8□□□□□ -1.32
SCFD1-212ENST00000554486 ADAM2Q99965 735 aa6.8□□□□□ -1.32
SCFD1-212ENST00000554486 FAM213AQ9BRX8 229 aa6.8□□□□□ -1.32
SCFD1-212ENST00000554486 TCHPQ9BT92 498 aa6.8□□□□□ -1.32
SCFD1-212ENST00000554486 MSTO1Q9BUK6 570 aa6.8□□□□□ -1.32
SCFD1-212ENST00000554486 CHST12Q9NRB3 414 aa6.8□□□□□ -1.32
SCFD1-212ENST00000554486 CATSPERZQ9NTU4 200 aa6.8□□□□□ -1.32
SCFD1-212ENST00000554486 CNOT6Q9ULM6 557 aaKnown RBP6.8□□□□□ -1.32
SCFD1-212ENST00000554486 HES2Q9Y543 173 aa6.8□□□□□ -1.32
SCFD1-212ENST00000554486 TNRC18O15417 2968 aaPredicted RBP6.8□□□□□ -1.32
SCFD1-212ENST00000554486 TCRBV5S2A0A599 114 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 KCNJ18B7U540 433 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 GOLGA6L19H0YKK7 550 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 CBX4O00257 560 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 MAPK13O15264 365 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 SLC16A3O15427 465 aaKnown RBP6.79□□□□□ -1.32
SCFD1-212ENST00000554486 AP5Z1O43299 807 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 NUAK1O60285 661 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 CLSTN1O94985 981 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 FGFR1OPO95684 399 aaKnown RBP6.79□□□□□ -1.32
SCFD1-212ENST00000554486 LTFP02788 710 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 CLTAP09496 248 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 STAG3L1P0CL83 205 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 EPB41P11171 864 aaKnown RBP6.79□□□□□ -1.32
SCFD1-212ENST00000554486 CSF2RAP15509 400 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 ATF7P17544 494 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-212ENST00000554486 LINC00310P59036 64 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 FAM189BP81408 668 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 CYP24A1Q07973 514 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 KCNJ12Q14500 433 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 FBLN7Q53RD9 439 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 TCP11X2Q5H9J9 407 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 C1orf220Q5T0J3 134 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 TWF2Q6IBS0 349 aaKnown RBP6.79□□□□□ -1.32
SCFD1-212ENST00000554486 PKN3Q6P5Z2 889 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 ARHGAP36Q6ZRI8 547 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 APTXQ7Z2E3 356 aaKnown RBP6.79□□□□□ -1.32
SCFD1-212ENST00000554486 FRMD5Q7Z6J6 570 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 MRPL10Q7Z7H8 261 aaKnown RBP6.79□□□□□ -1.32
SCFD1-212ENST00000554486 PTRH1Q86Y79 214 aaKnown RBP6.79□□□□□ -1.32
SCFD1-212ENST00000554486 ECHDC2Q86YB7 292 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 BRSK2Q8IWQ3 736 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 FAM186BQ8IYM0 893 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 THNSL1Q8IYQ7 743 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 GPD1LQ8N335 351 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 SEPT8Q92599 483 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 CNOT6LQ96LI5 555 aaKnown RBP6.79□□□□□ -1.32
SCFD1-212ENST00000554486 ADPGKQ9BRR6 497 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 HTATIP2Q9BUP3 242 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 CD244Q9BZW8 370 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 CXCL16Q9H2A7 254 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 NXF3Q9H4D5 531 aaKnown RBP6.79□□□□□ -1.32
SCFD1-212ENST00000554486 SMOC1Q9H4F8 434 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 KIAA1586Q9HCI6 787 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 RGS18Q9NS28 235 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 ASH2LQ9UBL3 628 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 CPSF3Q9UKF6 684 aaKnown RBP6.79□□□□□ -1.32
SCFD1-212ENST00000554486 FRMD4BQ9Y2L6 1034 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 PRKAB1Q9Y478 270 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 IPPQ9Y573 584 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 PCDHB2Q9Y5E7 798 aa6.79□□□□□ -1.32
SCFD1-212ENST00000554486 PDE4DIPQ5VU43 2346 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 PTPRSQ13332 1948 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 A0A0U1RQF3 1178 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 TTC26A0AVF1 554 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 ZNF233A6NK53 670 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 RFXAPO00287 272 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 KCNK3O14649 394 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 ZNF623O75123 536 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 RECQL4O94761 1208 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 GNA14O95837 355 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 LDHAP00338 332 aaKnown RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 TRIM49P0CI25 452 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 TRIM49CP0CI26 452 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 CXCL8P10145 99 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 ZSCAN20P17040 1043 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 SYN1P17600 705 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 EEF1GP26641 437 aaKnown RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 PSMC2P35998 433 aaKnown RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 MTIF2P46199 727 aaKnown RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 EPHA5P54756 1037 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 EPHB4P54760 987 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 OSTNP61366 133 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 POU5F1Q01860 360 aaKnown RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 PSMD6Q15008 389 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 KRT31Q15323 416 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 SNRNP35Q16560 246 aaKnown RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 KYAT1Q16773 422 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 CCDC40Q4G0X9 1142 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 MIIPQ5JXC2 388 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 CNKSR3Q6P9H4 555 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 ZC3H14Q6PJT7 736 aaKnown RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 ALKAL1Q6UXT8 129 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 FAM43BQ6ZT52 329 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 TMC6Q7Z403 805 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 APBB1IPQ7Z5R6 666 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 MILR1Q7Z6M3 343 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 STRA8Q7Z7C7 330 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 FAM114A1Q8IWE2 563 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 TMEM199Q8N511 208 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms