RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 GJB2P29033 226 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 CLK1P49759 484 aaKnown RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 ARFIP2P53365 341 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 CCDC173Q0VFZ6 552 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 GRAPQ13588 217 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 TOB2Q14106 344 aaPredicted RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 RRP1BQ14684 758 aaKnown RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 TNIP1Q15025 636 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 NAIF1Q69YI7 327 aaPredicted RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 TTLL10Q6ZVT0 673 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 RPAINQ86UA6 219 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 LIX1LQ8IVB5 337 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 CCDC83Q8IWF9 413 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 MPP5Q8N3R9 675 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 CCDC191Q8NCU4 936 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 GRAPLQ8TC17 118 aaPredicted RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 NUP133Q8WUM0 1156 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 CDHR1Q96JP9 859 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 PDLIM2Q96JY6 352 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 C20orf173Q96LM9 149 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 TBATAQ96M53 351 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 NEU1Q99519 415 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 EIF2AK1Q9BQI3 630 aaKnown RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 GLIS2Q9BZE0 524 aaPredicted RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 CD248Q9HCU0 757 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 PNPLA8Q9NP80 782 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 GPR108Q9NPR9 543 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 AFF4Q9UHB7 1163 aaKnown RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 CNOT7Q9UIV1 285 aaKnown RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 SMC3Q9UQE7 1217 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 MTMR6Q9Y217 621 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 JAG2Q9Y219 1238 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 CNPY2Q9Y2B0 182 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 ATP11BQ9Y2G3 1177 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 MYH3P11055 1940 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 MYH15Q9Y2K3 1946 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 XDHP47989 1333 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 HTTP42858 3142 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 DUOX1Q9NRD9 1551 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 MYH7P12883 1935 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 SYCE3A1L190 88 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 YDJCA8MPS7 323 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 RASA4BC9J798 803 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 E9PLN8 166 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 MYO1CO00159 1063 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 ZNF185O15231 689 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 RASA4O43374 803 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 DNAJB5O75953 348 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 CIAO1O76071 339 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 SCAF4O95104 1147 aaKnown RBP5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 ABHD16AO95870 558 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 PSMA5P28066 241 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 CTSWP56202 376 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 MXRA7P84157 204 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 WASHC5Q12768 1159 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 CTBP1Q13363 440 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 LRRC24Q50LG9 513 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 SLC44A4Q53GD3 710 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 FAM102AQ5T9C2 384 aaPredicted RBP5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 AGAP9Q5VTM2 703 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 METRNLQ641Q3 311 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 LMBRD2Q68DH5 695 aaPredicted RBP5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 HTR3DQ70Z44 454 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 RHOT2Q8IXI1 618 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 LMNTD2Q8IXW0 634 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 OR8H2Q8N162 312 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 CCDC33Q8N5R6 958 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 SLC15A4Q8N697 577 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 NECAB1Q8N987 351 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 KBTBD3Q8NAB2 608 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 NSUN7Q8NE18 718 aaKnown RBP5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 FAM46DQ8NEK8 389 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 OR56A1Q8NGH5 318 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 DEPTORQ8TB45 409 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 CPT1CQ8TCG5 803 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 CCT6BQ92526 530 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 EDAQ92838 391 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 CELF1Q92879 486 aaKnown RBP5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 CCDC47Q96A33 483 aaKnown RBP5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 RIPOR3Q96MK2 946 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 SEC62Q99442 399 aaKnown RBP5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 VKORC1Q9BQB6 163 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 ZSWIM1Q9BR11 485 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 CNPPD1Q9BV87 410 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 SEZ6LQ9BYH1 1024 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 WDR12Q9GZL7 423 aaKnown RBP5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 SIK2Q9H0K1 926 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 MRPS18AQ9NVS2 196 aaKnown RBP5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 TRPM5Q9NZQ8 1165 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 HMG20BQ9P0W2 317 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 ODF2LQ9ULJ1 636 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 PLEKHM1Q9Y4G2 1056 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 AFG3L2Q9Y4W6 797 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 THSD7BQ9C0I4 1608 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 COL4A1P02462 1669 aa5.72□□□□□ -1.49
MTHFD1-206ENST00000554353 PSME4Q14997 1843 aa5.71□□□□□ -1.49
MTHFD1-206ENST00000554353 MYO5AQ9Y4I1 1855 aaKnown RBP5.71□□□□□ -1.5
MTHFD1-206ENST00000554353 POM121BA6NF01 834 aa5.71□□□□□ -1.5
MTHFD1-206ENST00000554353 EYA2O00167 538 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms