RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 ATP8B3O60423 1300 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 EXOC3O60645 756 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 PHACTR2O75167 634 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 C7P10643 843 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 RARGP13631 454 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 CD6P30203 668 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 ATP5C1P36542 298 aaKnown RBP12.16□□□□□ -0.46
TUBB3-204ENST00000554116 KIF11P52732 1056 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 MFAP3P55082 362 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 DPYDQ12882 1025 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 BIRC3Q13489 604 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 PREPLQ4J6C6 727 aaPredicted RBP12.16□□□□□ -0.46
TUBB3-204ENST00000554116 KLHDC10Q6PID8 442 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 SV2AQ7L0J3 742 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 SLC9A9Q8IVB4 645 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 RGL4Q8IZJ4 473 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 ZNF276Q8N554 614 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 GOLGA5Q8TBA6 731 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 MDM1Q8TC05 714 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 PIWIL1Q96J94 861 aaKnown RBP12.16□□□□□ -0.46
TUBB3-204ENST00000554116 XPO6Q96QU8 1125 aaKnown RBP12.16□□□□□ -0.46
TUBB3-204ENST00000554116 HNRNPABQ99729 332 aaKnown RBP12.16□□□□□ -0.46
TUBB3-204ENST00000554116 GPR174Q9BXC1 333 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 KCTD10Q9H3F6 313 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 FBXO44Q9H4M3 255 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 FAM124BQ9H5Z6 455 aaPredicted RBP12.16□□□□□ -0.46
TUBB3-204ENST00000554116 THAP10Q9P2Z0 257 aaPredicted RBP12.16□□□□□ -0.46
TUBB3-204ENST00000554116 USP3Q9Y6I4 520 aa12.16□□□□□ -0.46
TUBB3-204ENST00000554116 RHOBTB3O94955 611 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 KIF20AO95235 890 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 IGLV3-19P01714 112 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 ADORA2BP29275 332 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 TPMTP51580 245 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 INCA1Q0VD86 236 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 KIAA1324Q6UXG2 1013 aaKnown RBP12.15□□□□□ -0.46
TUBB3-204ENST00000554116 NUDT18Q6ZVK8 323 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 UNC93AQ86WB7 457 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 ZCCHC9Q8N567 271 aaKnown RBP12.15□□□□□ -0.46
TUBB3-204ENST00000554116 JAKMIP2Q96AA8 810 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 CCDC34Q96HJ3 373 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 PRDM16Q9HAZ2 1276 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 SCUBE2Q9NQ36 999 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.15□□□□□ -0.46
TUBB3-204ENST00000554116 BTBD3Q9Y2F9 522 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 FNDC3AQ9Y2H6 1198 aaKnown RBP12.15□□□□□ -0.46
TUBB3-204ENST00000554116 NFE2L3Q9Y4A8 694 aa12.15□□□□□ -0.46
TUBB3-204ENST00000554116 A0A1B0GTW7 788 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 METTL12A8MUP2 240 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 PDXKO00764 312 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 NDUFS2O75306 463 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 HLA-DRAP01903 254 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 ATXN1LP0C7T5 689 aaKnown RBP12.14□□□□□ -0.47
TUBB3-204ENST00000554116 NCAM1P13591 858 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 PRKCHP24723 683 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 PLA2G4AP47712 749 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 AP3M2P53677 418 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 CAMK2BQ13554 666 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 SGSM1Q2NKQ1 1148 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 DCAF12L1Q5VU92 463 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 SDE2Q6IQ49 451 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 BHLHA9Q7RTU4 235 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 CCDC186Q7Z3E2 898 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 TMPRSS6Q8IU80 811 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 FMR1NBQ8N0W7 255 aaPredicted RBP12.14□□□□□ -0.47
TUBB3-204ENST00000554116 CADM4Q8NFZ8 388 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 SORCS1Q8WY21 1168 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 FOXJ1Q92949 421 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 CYFIP2Q96F07 1278 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 NACA2Q9H009 215 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 KIAA1522Q9P206 1035 aaPredicted RBP12.14□□□□□ -0.47
TUBB3-204ENST00000554116 SUSD2Q9UGT4 822 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 DNMT3LQ9UJW3 386 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 PCDHB9Q9Y5E1 797 aa12.14□□□□□ -0.47
TUBB3-204ENST00000554116 TP53BP1Q12888 1972 aaPredicted RBP12.14□□□□□ -0.47
TUBB3-204ENST00000554116 PTPRQQ9UMZ3 2332 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 CALUO43852 315 aaPredicted RBP12.13□□□□□ -0.47
TUBB3-204ENST00000554116 CILPO75339 1184 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 FAM200BP0CF97 657 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 ZNF883P0CG24 379 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 ZNF234Q14588 700 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 HLA-BQ31612 363 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 KCNT1Q5JUK3 1230 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 WDR45BQ5MNZ6 344 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 C10orf120Q5SQS8 335 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 SYCP2LQ5T4T6 812 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 PPP1R26Q5T8A7 1209 aaPredicted RBP12.13□□□□□ -0.47
TUBB3-204ENST00000554116 TMPRSS7Q7RTY8 843 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 FAM217AQ8IXS0 508 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 ZC3H3Q8IXZ2 948 aaKnown RBP12.13□□□□□ -0.47
TUBB3-204ENST00000554116 TMC2Q8TDI7 906 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 ORAI3Q9BRQ5 295 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 ZDHHC5Q9C0B5 715 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 GAREM1Q9H706 876 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 PNPLA8Q9NP80 782 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 EIF2B4Q9UI10 523 aaKnown RBP12.13□□□□□ -0.47
TUBB3-204ENST00000554116 LSM7Q9UK45 103 aaKnown RBP12.13□□□□□ -0.47
TUBB3-204ENST00000554116 AGO1Q9UL18 857 aaKnown RBP12.13□□□□□ -0.47
TUBB3-204ENST00000554116 MAPK8IP1Q9UQF2 711 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 APOBEC2Q9Y235 224 aaKnown RBP12.13□□□□□ -0.47
TUBB3-204ENST00000554116 RAXQ9Y2V3 346 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms