RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 BROXQ5VW32 411 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 APOBEC3HQ6NTF7 200 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 TRIM65Q6PJ69 517 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 SHC4Q6S5L8 630 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 EPM2AIP1Q7L775 607 aaPredicted RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 ALYREFQ86V81 257 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 FAM26EQ8N5C1 309 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 MAFAQ8NHW3 353 aaPredicted RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 PIP4K2CQ8TBX8 421 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 BCL7CQ8WUZ0 217 aaPredicted RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 DNAJC9Q8WXX5 260 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 UBXN10Q96LJ8 280 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CCDC77Q9BR77 488 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 HAUS8Q9BT25 410 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 RSRP1Q9BUV0 290 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 NAPBQ9H115 298 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 NEK6Q9HC98 313 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 EMC3Q9P0I2 261 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 FRRS1LQ9P0K9 344 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CTTNBP2NLQ9P2B4 639 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 NCDNQ9UBB6 729 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PNMA8BQ9ULN7 279 aaPredicted RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 APOBEC2Q9Y235 224 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 A0A087X0B3 334 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 A0A096LPE4 126 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 A0A1W2PPZ6 126 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CTAGE9A4FU28 777 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 AQP12BA6NM10 295 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CPLX1O14810 134 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PSMA7O14818 248 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 KLHL41O60662 606 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 GUCY1B2O75343 617 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 EPN2O95208 641 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 GUCA1CO95843 209 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 DNTTP04053 509 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 ASLP04424 464 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 ASGR2P07307 311 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CHRNB1P11230 501 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 NCAM1P13591 858 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 HMOX2P30519 316 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 EPS15P42566 896 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 BCAR1P56945 870 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 KCNMA1Q12791 1236 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 TRPC3Q13507 836 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 IKBKEQ14164 716 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 SF1Q15637 639 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 EZH2Q15910 746 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 STX1AQ16623 288 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 ZNF569Q5MCW4 686 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 NBPF12Q5TAG4 269 aaPredicted RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 PRAMEF9Q5VWM5 478 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 ALS2CLQ60I27 953 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 KRT40Q6A162 431 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 KCNT2Q6UVM3 1135 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 NLRC3Q7RTR2 1065 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 SPATA24Q86W54 205 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 VSIG1Q86XK7 387 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 GIMAP8Q8ND71 665 aaPredicted RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 DPF2Q92785 391 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 NELL1Q92832 810 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 KLHL29Q96CT2 875 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CHFRQ96EP1 664 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PLPPR2Q96GM1 343 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 DNAJC1Q96KC8 554 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 SENP6Q9GZR1 1112 aaPredicted RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 POFUT1Q9H488 388 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 TOPORSQ9NS56 1045 aaPredicted RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 GID8Q9NWU2 228 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 BARHL2Q9NY43 387 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 NYAP2Q9P242 653 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 DPP7Q9UHL4 492 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 RIMKLBQ9ULI2 386 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 MAPRE3Q9UPY8 281 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 POLHQ9Y253 713 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 A6NLC8 198 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.17□□□□□ -1.74
RDH11-204ENST00000553578 CHURC1-FNTBB4DL54 471 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 INO80B-WBP1J3KQ70 363 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 M0R3H8 397 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 FOXN3O00409 490 aaPredicted RBP4.17□□□□□ -1.74
RDH11-204ENST00000553578 SCDO00767 359 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 GPR39O43194 453 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 OPHN1O60890 802 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 DGKIO75912 1065 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 BAG3O95817 575 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 CHEK2O96017 543 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 TFPTP0C1Z6 253 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 UBTFL6P0CB48 400 aaPredicted RBP4.17□□□□□ -1.74
RDH11-204ENST00000553578 ZCCHC18P0CG32 403 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 COL6A2P12110 1019 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 IDEP14735 1019 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 CYP7A1P22680 504 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 GGT5P36269 586 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 ADCYAP1R1P41586 468 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 ME1P48163 572 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 ZNF280AP59817 542 aaPredicted RBP4.17□□□□□ -1.74
RDH11-204ENST00000553578 TGFB2P61812 414 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 AMPD2Q01433 879 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 CREMQ03060 361 aa4.17□□□□□ -1.74
RDH11-204ENST00000553578 GOLGA8FQ08AF8 430 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms