RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CLEC20AQ6ZU45 233 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 CENPUQ71F23 418 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 PDZD4Q76G19 769 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-221ENST00000553498 ZNF771Q7L3S4 317 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-221ENST00000553498 TAOK1Q7L7X3 1001 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 BNIPLQ7Z465 357 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 ANKS1BQ7Z6G8 1248 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 OSTM1Q86WC4 334 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 CDKL3Q8IVW4 592 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-221ENST00000553498 PPIL6Q8IXY8 311 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 ACTL9Q8TC94 416 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 CD99L2Q8TCZ2 262 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 HSPH1Q92598 858 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 NTAN1Q96AB6 310 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 SUSD3Q96L08 255 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 CFAP57Q96MR6 1250 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 SLC2A13Q96QE2 648 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 CAPS2Q9BXY5 557 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 GOLGA2P5Q9HBQ8 144 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 POPDC2Q9HBU9 364 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 NGRNQ9NPE2 291 aaKnown RBP7.6□□□□□ -1.19
ATXN3-221ENST00000553498 TMEM161AQ9NX61 479 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 FETUBQ9UGM5 382 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 PCSK1NQ9UHG2 260 aa7.6□□□□□ -1.19
ATXN3-221ENST00000553498 WDR81Q562E7 1941 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 A0A1W2PQ45 241 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 A0A1W2PQY0 241 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 CARNS1A5YM72 827 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 H3BRJ5 948 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 TULP2O00295 520 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 SYN3O14994 580 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 ALOX15BO15296 676 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 TP73O15350 636 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 RGS16O15492 202 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 SPAG6O75602 509 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 B3GAT3O94766 335 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 RBP3P10745 1247 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 LCP1P13796 627 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 SELPP16109 830 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 GRK4P32298 578 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 CYP2C18P33260 490 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 ARL4AP40617 200 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 HCAR3P49019 387 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 LMAN1P49257 510 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 CDK7P50613 346 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 HDAC4P56524 1084 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 BCAR1P56945 870 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 EIF3EP60228 445 aaKnown RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 ADCY1Q08828 1119 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 SCAPQ12770 1279 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 SMARCB1Q12824 385 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 GPS1Q13098 491 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 SLC29A2Q14542 456 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 TLR1Q15399 786 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 NFE2Q16621 373 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 SMTNL2Q2TAL5 461 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 ARL13BQ3SXY8 428 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 ANKRD20A8PQ5CZ79 823 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 MDH1BQ5I0G3 518 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 ACBD5Q5T8D3 534 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 RNASEH2BQ5TBB1 312 aaKnown RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 PM20D1Q6GTS8 502 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 TRNP1Q6NT89 227 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 SCYL2Q6P3W7 929 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 PAQR9Q6ZVX9 377 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 CYP4V2Q6ZWL3 525 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 FAM35AQ86V20 835 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 PPP1R13LQ8WUF5 828 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 RIN2Q8WYP3 895 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 ARL8AQ96BM9 186 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 CENPTQ96BT3 561 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 TLCD1Q96CP7 247 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 ZNF837Q96EG3 531 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 FUBP3Q96I24 572 aaKnown RBP eCLIP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 NPY6RQ99463 290 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 MED10Q9BTT4 135 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 COL25A1Q9BXS0 654 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 B3GNT5Q9BYG0 378 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.59□□□□□ -1.191e-11■■■■□ 25.2
ATXN3-221ENST00000553498 BRD8Q9H0E9 1235 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 EPB41L4BQ9H329 900 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 SEMA4AQ9H3S1 761 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 PCDH18Q9HCL0 1135 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 DMAP1Q9NPF5 467 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 TIMMDC1Q9NPL8 285 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 KRT82Q9NSB4 513 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 TRMT13Q9NUP7 481 aaKnown RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 KLHL11Q9NVR0 708 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 CWC15Q9P013 229 aaKnown RBP7.59□□□□□ -1.19
ATXN3-221ENST00000553498 PAK5Q9P286 719 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 ACTL7BQ9Y614 415 aa7.59□□□□□ -1.19
ATXN3-221ENST00000553498 A0A087WUV0 522 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-221ENST00000553498 CDC14CA4D256 554 aa7.58□□□□□ -1.2
ATXN3-221ENST00000553498 CAPN9O14815 690 aa7.58□□□□□ -1.2
ATXN3-221ENST00000553498 RASGRF2O14827 1237 aa7.58□□□□□ -1.2
ATXN3-221ENST00000553498 CHADO15335 359 aa7.58□□□□□ -1.2
ATXN3-221ENST00000553498 NCAM2O15394 837 aa7.58□□□□□ -1.2
ATXN3-221ENST00000553498 MGEA5O60502 916 aa7.58□□□□□ -1.2
ATXN3-221ENST00000553498 CDH16O75309 829 aa7.58□□□□□ -1.2
ATXN3-221ENST00000553498 DKK1O94907 266 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms