RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 IQUBQ8NA54 791 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 LINC00301Q8NCQ3 95 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 TAF4BQ92750 862 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 CYFIP2Q96F07 1278 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 PNPLA8Q9NP80 782 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 SLC39A2Q9NP94 309 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 CLEC4EQ9ULY5 219 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 SNX11Q9Y5W9 270 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 APC2O95996 2303 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 PTPRBP23467 1997 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 FAM149AA5PLN7 773 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 TIMM44O43615 452 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 EPHX1P07099 455 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 RALAP11233 206 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 ASPAP45381 313 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 DLG4P78352 724 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 EIF4HQ15056 248 aaKnown RBP17.74■□□□□ 0.43
CACNB3-222ENST00000552465 STK38Q15208 465 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 SMAD1Q15797 465 aaKnown RBP17.74■□□□□ 0.43
CACNB3-222ENST00000552465 ZACNQ401N2 412 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 CCDC186Q7Z3E2 898 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 CACUL1Q86Y37 369 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 PDCD7Q8N8D1 485 aaKnown RBP17.74■□□□□ 0.43
CACNB3-222ENST00000552465 SORCS1Q8WY21 1168 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 SNX19Q92543 992 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 CRELD1Q96HD1 420 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 TWNKQ96RR1 684 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 DCLK3Q9C098 648 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 C6orf106Q9H6K1 298 aaPredicted RBP17.74■□□□□ 0.43
CACNB3-222ENST00000552465 CLIC5Q9NZA1 410 aa17.74■□□□□ 0.43
CACNB3-222ENST00000552465 AGO1Q9UL18 857 aaKnown RBP17.74■□□□□ 0.43
CACNB3-222ENST00000552465 ACACAQ13085 2346 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 STX6O43752 255 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 ZIC2O95409 532 aaPredicted RBP17.73■□□□□ 0.43
CACNB3-222ENST00000552465 ASS1P00966 412 aaKnown RBP17.73■□□□□ 0.43
CACNB3-222ENST00000552465 HMBSP08397 361 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 TRIM21P19474 475 aaKnown RBP17.73■□□□□ 0.43
CACNB3-222ENST00000552465 CASP1P29466 404 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 CORO1AP31146 461 aaKnown RBP17.73■□□□□ 0.43
CACNB3-222ENST00000552465 TEAD4Q15561 434 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 PTPRNQ16849 979 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 TMEM215Q68D42 235 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 SPOPLQ6IQ16 392 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 SERPINA13PQ6UXR4 307 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 OR2T3Q8NH03 318 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 GOLGA5Q8TBA6 731 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 CDK5RAP1Q96SZ6 601 aaKnown RBP17.73■□□□□ 0.43
CACNB3-222ENST00000552465 SLC2A11Q9BYW1 496 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 CIPCQ9C0C6 399 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 BLZF1Q9H2G9 400 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 OSGEPQ9NPF4 335 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 DMAC2Q9NW81 257 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 RASAL2Q9UJF2 1139 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 MTMR6Q9Y217 621 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 ANKRD6Q9Y2G4 727 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.73■□□□□ 0.43
CACNB3-222ENST00000552465 USP3Q9Y6I4 520 aa17.73■□□□□ 0.43
CACNB3-222ENST00000552465 URB1O60287 2271 aaKnown RBP17.73■□□□□ 0.43
CACNB3-222ENST00000552465 IGSF10Q6WRI0 2623 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 PVALEFA0A1B0GWK0 134 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 KCNK3O14649 394 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 SPTLC2O15270 562 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 PCDHGA12O60330 932 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 PPP6R2O75170 966 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 CYBBP04839 570 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 ACSL1P33121 698 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 GRK6P43250 576 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 INCA1Q0VD86 236 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 EFEMP1Q12805 493 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 CAMK2GQ13555 558 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-222ENST00000552465 SV2AQ7L0J3 742 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 DENND1CQ8IV53 801 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 CPXM2Q8N436 756 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 ADAM32Q8TC27 787 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 NT5C1AQ9BXI3 368 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 LHX5Q9H2C1 402 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 ZSCAN16Q9H4T2 348 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-222ENST00000552465 UPF2Q9HAU5 1272 aaKnown RBP17.72■□□□□ 0.43
CACNB3-222ENST00000552465 TM9SF3Q9HD45 589 aa17.72■□□□□ 0.43
CACNB3-222ENST00000552465 LAMA5O15230 3695 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 C7P10643 843 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 HLA-EP13747 358 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 GRIA4P48058 902 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 CCDC157Q569K6 752 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 SHC4Q6S5L8 630 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 SLC9A9Q8IVB4 645 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 TMC2Q8TDI7 906 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 DDI1Q8WTU0 396 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 TMEM174Q8WUU8 243 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 IGSF8Q969P0 613 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 DUSP16Q9BY84 665 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 MAGEF1Q9HAY2 307 aa17.71■□□□□ 0.43
CACNB3-222ENST00000552465 E9PAM4 449 aa17.7■□□□□ 0.42
CACNB3-222ENST00000552465 H0Y8X5 98 aa17.7■□□□□ 0.42
CACNB3-222ENST00000552465 IKBKBO14920 756 aa17.7■□□□□ 0.42
CACNB3-222ENST00000552465 TSPAN3O60637 253 aa17.7■□□□□ 0.42
CACNB3-222ENST00000552465 KIF20AO95235 890 aa17.7■□□□□ 0.42
CACNB3-222ENST00000552465 HLA-DRAP01903 254 aa17.7■□□□□ 0.42
CACNB3-222ENST00000552465 CCT8P50990 548 aa17.7■□□□□ 0.42
CACNB3-222ENST00000552465 ARID5AQ03989 594 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms