RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 METTL23Q86XA0 190 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 C10orf67Q8IYJ2 551 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 CCDC197Q8NCU1 140 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 MCUQ8NE86 351 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 GDAP1Q8TB36 358 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 RNF139Q8WU17 664 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SMARCD1Q96GM5 515 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SGSM3Q96HU1 749 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 OLFM3Q96PB7 478 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SLC9A7Q96T83 725 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 PAFAH2Q99487 392 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 ACBD6Q9BR61 282 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 CSNK1G1Q9HCP0 422 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 TMPRSS4Q9NRS4 437 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 NOD1Q9Y239 953 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 ZNF638Q14966 1978 aaKnown RBP14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SPAG7O75391 227 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SPAG6O75602 509 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 CABYRO75952 493 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 METTL18O95568 372 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 APRTP07741 180 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 USP17L7P0C7H9 530 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 IBSPP21815 317 aaPredicted RBP14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 PAX3P23760 479 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 MSH2P43246 934 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 MAGEA9P43362 315 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 BRCC3P46736 316 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 RNF187Q5TA31 235 aaPredicted RBP14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 HEATR6Q6AI08 1181 aaKnown RBP14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 FAM171BQ6P995 826 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 CAND1Q86VP6 1230 aaKnown RBP14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 VPS52Q8N1B4 723 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 AGGF1Q8N302 714 aaeCLIP14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 CCDC33Q8N5R6 958 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SLC7A14Q8TBB6 771 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 DENND1AQ8TEH3 1009 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 DCAKDQ8WVC6 231 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 TFB1MQ8WVM0 346 aaKnown RBP14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 MYLPFQ96A32 169 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 UROC1Q96N76 676 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SMC6Q96SB8 1091 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 CYTH2Q99418 400 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 ELAC2Q9BQ52 826 aaKnown RBP14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 PNPLA8Q9NP80 782 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SAMD15Q9P1V8 674 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SMG5Q9UPR3 1016 aaKnown RBP14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SQORQ9Y6N5 450 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 THSD7BQ9C0I4 1608 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 A0A1W2PPM1 405 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 KBTBD13C9JR72 458 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 M0QZQ0 153 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 LTFP02788 710 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 ADRA1BP35368 520 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 AIF1P55008 147 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 TUSC3Q13454 348 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 PAN2Q504Q3 1202 aaKnown RBP14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 RNF180Q86T96 592 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 ECHDC2Q86YB7 292 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 NTAN1Q96AB6 310 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 MAGEB18Q96M61 343 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 KIF9Q9HAQ2 790 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 WDR6Q9NNW5 1121 aaKnown RBP14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 DSEQ9UL01 958 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 INPP5FQ9Y2H2 1132 aa14.5□□□□□ -0.09
RAB3IP-216ENST00000552199 DNAH12Q6ZR08 3092 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 SF3B1O75533 1304 aaKnown RBP eCLIP14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 GOLGA6L7A0A1B0GV03 622 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 MFSD11O43934 449 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 VAV1P15498 845 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 TPSB2P20231 275 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 ACLYP53396 1101 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 WDR4P57081 412 aaKnown RBP14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 YWHAGP61981 247 aaKnown RBP eCLIP14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 IL9RQ01113 521 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 TPSAB1Q15661 275 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 INTS6LQ5JSJ4 861 aaKnown RBP14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 CCDC121Q6ZUS5 278 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 BHLHA9Q7RTU4 235 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 ZNF598Q86UK7 904 aaKnown RBP14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 C4orf33Q8N1A6 199 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 HTR3CQ8WXA8 447 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 PGAP3Q96FM1 320 aaPredicted RBP14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 RHOBTB2Q9BYZ6 727 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 SSU72Q9NP77 194 aaKnown RBP14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 RRN3Q9NYV6 651 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 FBXW11Q9UKB1 542 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 TCRBV9S1A1TA0A576 114 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 EEF2KO00418 725 aaKnown RBP14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 CREB3O43889 395 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 AOC2O75106 756 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 PIAS1O75925 651 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 ASMTLO95671 621 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 NCAM1P13591 858 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 MAGEA3P43357 314 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 SCAPQ12770 1279 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 NOGQ13253 232 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 SEMA5AQ13591 1074 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 DPYSQ14117 519 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 ITIH4Q14624 930 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 PAFAH1B3Q15102 231 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms