RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PRDM8Q9NQV8 689 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 NDRG4Q9ULP0 352 aaKnown RBP6□□□□□ -1.45
CPSF6-206ENST00000550987 ANKRD30BQ9BXX2 1392 aa6□□□□□ -1.45
CPSF6-206ENST00000550987 COL5A2P05997 1499 aaPredicted RBP6□□□□□ -1.45
CPSF6-206ENST00000550987 TPRP12270 2363 aaKnown RBP6□□□□□ -1.45
CPSF6-206ENST00000550987 IQGAP3Q86VI3 1631 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 EFCAB8A8MWE9 144 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 CAPN14A8MX76 684 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 GOLGA6L6A8MZA4 724 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 LEFTY2O00292 366 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 TRIAP1O43715 76 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 TSPAN15O95858 294 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 PRKCBP05771 671 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 IFIT1P09914 478 aaKnown RBP5.99□□□□□ -1.45
CPSF6-206ENST00000550987 HGFP14210 728 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 KLRK1P26718 216 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 NDUFV1P49821 464 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 GATMP50440 423 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 PGDP52209 483 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 PRKAA2P54646 552 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 RNASE9P60153 205 aaKnown RBP5.99□□□□□ -1.45
CPSF6-206ENST00000550987 MPP1Q00013 466 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 TLE2Q04725 743 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 MAPK7Q13164 816 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 ST3GAL2Q16842 350 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 AGAP9Q5VTM2 703 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 RGS7BPQ6MZT1 257 aaPredicted RBP5.99□□□□□ -1.45
CPSF6-206ENST00000550987 NFRKBQ6P4R8 1299 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 HEATR4Q86WZ0 1026 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 FSTL5Q8N475 847 aaPredicted RBP5.99□□□□□ -1.45
CPSF6-206ENST00000550987 TMEM57Q8N5G2 664 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 ZNF483Q8TF39 744 aaPredicted RBP5.99□□□□□ -1.45
CPSF6-206ENST00000550987 TMEM171Q8WVE6 324 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 ZBTB45Q96K62 511 aaPredicted RBP5.99□□□□□ -1.45
CPSF6-206ENST00000550987 NELL2Q99435 816 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 MNTQ99583 582 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 ZSWIM1Q9BR11 485 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 DDX23Q9BUQ8 820 aaKnown RBP5.99□□□□□ -1.45
CPSF6-206ENST00000550987 CXorf36Q9H7Y0 433 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 CHODLQ9H9P2 273 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 UBN1Q9NPG3 1134 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 HSFX1Q9UBD0 423 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 TTC21AQ8NDW8 1320 aa5.99□□□□□ -1.45
CPSF6-206ENST00000550987 ZNF644Q9H582 1327 aaPredicted RBP5.99□□□□□ -1.45
CPSF6-206ENST00000550987 USP24Q9UPU5 2620 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 ACACBO00763 2458 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 E7ENX8 843 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 E7EVH7 732 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 H0Y3Z8 333 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 CD3EAPO15446 510 aaKnown RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 HOXC11O43248 304 aaPredicted RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 PPP6R2O75170 966 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 RAD17O75943 681 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 SUN1O94901 812 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 LMNAP02545 664 aaKnown RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 FGFR4P22455 802 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 CD6P30203 668 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 NTSR1P30989 418 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 APOBEC3AP31941 199 aaPredicted RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 MTHFSP49914 203 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 ANXA11P50995 505 aaKnown RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 PNLIPRP1P54315 467 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 RPS7P62081 194 aaKnown RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 TAP2Q03519 686 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 UBE3AQ05086 875 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 EFR3AQ14156 821 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 GRM4Q14833 912 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 BTBD16Q32M84 506 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 SPDYE7PQ495Y7 208 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 CD300EQ496F6 205 aaPredicted RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 ZNF648Q5T619 568 aaPredicted RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 FAM102AQ5T9C2 384 aaPredicted RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 ABLIM2Q6H8Q1 611 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 FAM109BQ6ICB4 259 aaPredicted RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 FAM180BQ6P0A1 224 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 CLEC9AQ6UXN8 241 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 TMTC1Q8IUR5 882 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 HERC6Q8IVU3 1022 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 BHLHE22Q8NFJ8 381 aaPredicted RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 CEP70Q8NHQ1 597 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 CPT1BQ92523 772 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 SDCCAG3Q96C92 435 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 HVCN1Q96D96 273 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 KCNC2Q96PR1 638 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 DCLRE1CQ96SD1 692 aaKnown RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 CDX2Q99626 313 aaPredicted RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 GPR87Q9BY21 358 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 NOD2Q9HC29 1040 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 CTTNBP2NLQ9P2B4 639 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 C19orf53Q9UNZ5 99 aaPredicted RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 ZFR2Q9UPR6 939 aaKnown RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 TMEM98Q9Y2Y6 226 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 RRP7AQ9Y3A4 280 aaKnown RBP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.98□□□□□ -1.45
CPSF6-206ENST00000550987 ABCC6O95255 1503 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 ACEP12821 1306 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 ITIH6Q6UXX5 1313 aa5.98□□□□□ -1.45
CPSF6-206ENST00000550987 DYTNA2CJ06 578 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 BTBD11A6QL63 1104 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 DIRC3C9JPN6 131 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms