RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 HSDL1Q3SXM5 330 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 TMEM240Q5SV17 173 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 USP17L6PQ6QN14 398 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 FAM180AQ6UWF9 173 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 LRRC55Q6ZSA7 311 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 ZNF572Q7Z3I7 529 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-214ENST00000550893 DDX42Q86XP3 938 aaKnown RBP eCLIP5.56□□□□□ -1.52
SCAF11-214ENST00000550893 FBXL16Q8N461 479 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 PROKR1Q8TCW9 393 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 HOXB13Q92826 284 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-214ENST00000550893 CEP89Q96ST8 783 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 PCYT2Q99447 389 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 UBAC1Q9BSL1 405 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 C16orf70Q9BSU1 422 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 SLC46A2Q9BY10 475 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 TEX101Q9BY14 249 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 WDR11Q9BZH6 1224 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 ALDH8A1Q9H2A2 487 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-214ENST00000550893 TMX1Q9H3N1 280 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 MTMR10Q9NXD2 777 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 CNPY2Q9Y2B0 182 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 NR2E3Q9Y5X4 410 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 HS3ST4Q9Y661 456 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 IGLV3-22A0A075B6J6 115 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 A0A0U1RQG5 324 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-214ENST00000550893 CXorf49A8MYA2 514 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-214ENST00000550893 K7ESF4 209 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 ZNF185O15231 689 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 ATP9AO75110 1047 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 ABHD16AO95870 558 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 ZNF286BP0CG31 522 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 CYP2C9P11712 490 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 CSF2RAP15509 400 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 KCNA2P16389 499 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 LAG3P18627 525 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 MGAT1P26572 445 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 ICAM3P32942 547 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 CYP2C18P33260 490 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 SREBF1P36956 1147 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 SLC5A3P53794 718 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 MALLQ13021 153 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 NOMO1Q15155 1222 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 TIGD2Q4W5G0 525 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 LY6G5CQ5SRR4 150 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 MBNL2Q5VZF2 373 aaKnown RBP5.55□□□□□ -1.52
SCAF11-214ENST00000550893 METRNLQ641Q3 311 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 MRGPRGQ86SM5 289 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 SESTD1Q86VW0 696 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 MICU3Q86XE3 530 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 VRK3Q8IV63 474 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 ZFP28Q8NHY6 868 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 CYP2W1Q8TAV3 490 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 AFG1LQ8WV93 481 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 RUFY2Q8WXA3 655 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 PGBD1Q96JS3 809 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 SLC2A13Q96QE2 648 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 UHRF1Q96T88 793 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-214ENST00000550893 RMDN3Q96TC7 470 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 PRRX2Q99811 253 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 TTPALQ9BTX7 342 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 MAF1Q9H063 256 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 SPC25Q9HBM1 224 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 VAT1LQ9HCJ6 419 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 STARD7Q9NQZ5 370 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 SLC5A4Q9NY91 659 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 Q9Y3F1 56 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 PCDHGA2Q9Y5H1 932 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 PCDHA1Q9Y5I3 950 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 WDFY4Q6ZS81 3184 aa5.55□□□□□ -1.52
SCAF11-214ENST00000550893 DMDP11532 3685 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 CENPVL1A0A0U1RR11 272 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 EPOPA6NHQ4 379 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 DIRC3C9JPN6 131 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 RNASET2O00584 256 aaKnown RBP5.54□□□□□ -1.52
SCAF11-214ENST00000550893 PJA2O43164 708 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 LPXNO60711 386 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 NCR1O76036 304 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 CTDNEP1O95476 244 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 TIMP1P01033 207 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 LINC00271P0C7V0 271 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 RBP3P10745 1247 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 ALOX15P16050 662 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-214ENST00000550893 RPS6KB1P23443 525 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 SMARCA1P28370 1054 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 MCM5P33992 734 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 PER3P56645 1201 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 CLRN1P58418 232 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 ITGB3BPQ13352 177 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-214ENST00000550893 ITGA7Q13683 1181 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 PPP2R5BQ15173 497 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 PDCD4Q53EL6 469 aaKnown RBP5.54□□□□□ -1.52
SCAF11-214ENST00000550893 CRB2Q5IJ48 1285 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 LAIR1Q6GTX8 287 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 KCNV1Q6PIU1 500 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 PCSK4Q6UW60 755 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 PQLC1Q8N2U9 271 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 USP38Q8NB14 1042 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 SCFD2Q8WU76 684 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 STON2Q8WXE9 905 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 PIBF1Q8WXW3 757 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms