RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 ZNF534Q76KX8 674 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 DEFB106AQ8N104 65 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 GSDMBQ8TAX9 411 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 STK32AQ8WU08 396 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 TEKT4Q8WW24 435 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 EBNA1BP2Q99848 306 aaKnown RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 POLR2AP24928 1970 aaKnown RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 SIP14410 1827 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 H3BRJ5 948 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 PDHXO00330 501 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 DPYSL4O14531 572 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 MDM4O15151 490 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 SNAI1O95863 264 aaPredicted RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 C1QAP02745 245 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 TPBGLP0DKB5 382 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 MGAT1P26572 445 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 ARL4AP40617 200 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 NDUFV1P49821 464 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 MXRA7P84157 204 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 ADIGQ0VDE8 80 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 BST2Q10589 180 aaKnown RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 SNAPC2Q13487 334 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 KYAT1Q16773 422 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 SLC27A1Q6PCB7 646 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 COLGALT1Q8NBJ5 622 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 MICAL1Q8TDZ2 1067 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 TFB1MQ8WVM0 346 aaKnown RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 SNX27Q96L92 541 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 SIGLEC10Q96LC7 697 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 BTBD10Q9BSF8 475 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 GCOM2Q9BZD3 368 aaPredicted RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 C20orf27Q9GZN8 174 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 SLC5A4Q9NY91 659 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 KAT6AQ92794 2004 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 MCM3APO60318 1980 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 MFSD11O43934 449 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 USP12O75317 370 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 LYPLA1O75608 230 aaPredicted RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 KRT36O76013 467 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 PDHA1P08559 390 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 KCNA4P22459 653 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 IGFBP6P24592 240 aaPredicted RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 TKTP29401 623 aaKnown RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 ABCG1P45844 678 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 RPL10AP62906 217 aaKnown RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 POU5F1BQ06416 359 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 ZNF792Q3KQV3 632 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 FBXO47Q5MNV8 452 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 NCBP2-AS2Q69YL0 99 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 BZW1Q7L1Q6 419 aaKnown RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 CTU1Q7Z7A3 348 aaKnown RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 CHSY1Q86X52 802 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 DNAJB3Q8WWF6 145 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 HTR3CQ8WXA8 447 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 SKA1Q96BD8 255 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 FAXDC2Q96IV6 333 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 SGIP1Q9BQI5 828 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 SAR1AQ9NR31 198 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 MTMR10Q9NXD2 777 aa9.5□□□□□ -0.89
UBE2N-205ENST00000550657 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 MRPL42Q9Y6G3 142 aaKnown RBP9.5□□□□□ -0.89
UBE2N-205ENST00000550657 CCDC78A2IDD5 438 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 HMX2A2RU54 273 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 KPNA7A9QM74 516 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 B2RBV5 119 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 KCNK1O00180 336 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 GSC2O15499 205 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 ADCY6O43306 1168 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 MMP3P08254 477 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 PRKCHP24723 683 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 PTDSS1P48651 473 aaKnown RBP9.49□□□□□ -0.89
UBE2N-205ENST00000550657 BCAT1P54687 386 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 CCNA1P78396 465 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 PPP2R5DQ14738 602 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 RCN1Q15293 331 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 DPYSL2Q16555 572 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 NBPF20Q3BBV1 942 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 DCAF4L1Q3SXM0 396 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 IFNLR1Q8IU57 520 aaPredicted RBP9.49□□□□□ -0.89
UBE2N-205ENST00000550657 TTC39CQ8N584 583 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 ANKRD52Q8NB46 1076 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 FBXO27Q8NI29 283 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 ZNF398Q8TD17 642 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 PGBD4Q96DM1 585 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 RTP4Q96DX8 246 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 PTCD3Q96EY7 689 aaKnown RBP9.49□□□□□ -0.89
UBE2N-205ENST00000550657 MED10Q9BTT4 135 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 CNTN3Q9P232 1028 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.49□□□□□ -0.89
UBE2N-205ENST00000550657 RNF103O00237 685 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 TRDMT1O14717 391 aaKnown RBP9.49□□□□□ -0.89
UBE2N-205ENST00000550657 CYP2C9P11712 490 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 PSMB4P28070 264 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 MLH1P40692 756 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 SNX16P57768 344 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 PDE1BQ01064 536 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 DGKDQ16760 1214 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 ATG16L1Q676U5 607 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 NOTUMQ6P988 496 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 PIGZQ86VD9 579 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms