RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 PTGISQ16647 500 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 UBE2SQ16763 222 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 LRRC26Q2I0M4 334 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 PRR16Q569H4 304 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 PITRM1Q5JRX3 1037 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 FAM109BQ6ICB4 259 aaPredicted RBP5.96□□□□□ -1.46
PFDN5-209ENST00000550069 TIGD7Q6NT04 549 aaPredicted RBP5.96□□□□□ -1.46
PFDN5-209ENST00000550069 KLHDC10Q6PID8 442 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 PIK3AP1Q6ZUJ8 805 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 GAREM2Q75VX8 874 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 CLEC14AQ86T13 490 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 C11orf74Q86VG3 221 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 SLC41A1Q8IVJ1 513 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 SUGP1Q8IWZ8 645 aaKnown RBP5.96□□□□□ -1.46
PFDN5-209ENST00000550069 PIK3C3Q8NEB9 887 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 IL31RAQ8NI17 732 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 ETNPPLQ8TBG4 499 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 TCP11Q8WWU5 503 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 PIBF1Q8WXW3 757 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 KAT2BQ92831 832 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 GLG1Q92896 1179 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 FERMT2Q96AC1 680 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 TMEM176AQ96HP8 235 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 RPL10LQ96L21 214 aaKnown RBP5.96□□□□□ -1.46
PFDN5-209ENST00000550069 WDR92Q96MX6 357 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 CEP89Q96ST8 783 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 POLR3CQ9BUI4 534 aaPredicted RBP5.96□□□□□ -1.46
PFDN5-209ENST00000550069 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 C12orf65Q9H3J6 166 aaKnown RBP5.96□□□□□ -1.46
PFDN5-209ENST00000550069 C17orf75Q9HAS0 396 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 ANKEF1Q9NU02 776 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 HECAQ9UBI9 543 aaPredicted RBP5.96□□□□□ -1.46
PFDN5-209ENST00000550069 ZFR2Q9UPR6 939 aaKnown RBP5.96□□□□□ -1.46
PFDN5-209ENST00000550069 MYH11P35749 1972 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 TTC3P53804 2025 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 MICAL3Q7RTP6 2002 aa5.96□□□□□ -1.46
PFDN5-209ENST00000550069 COL4A6Q14031 1691 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 hCG_1642624A0A1W2PR95 340 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 BTBD18B2RXH4 712 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 CTIFO43310 598 aaKnown RBP5.95□□□□□ -1.46
PFDN5-209ENST00000550069 CCNT1O60563 726 aaKnown RBP5.95□□□□□ -1.46
PFDN5-209ENST00000550069 ATP9AO75110 1047 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 COQ9O75208 318 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 LARGE1O95461 756 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 CXCL10P02778 98 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 OR52Z1P0C646 297 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 ZNF20P17024 532 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 RPA1P27694 616 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 GJB2P29033 226 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 CALCRLQ16602 461 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 LETM2Q2VYF4 491 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 ZNF568Q3ZCX4 644 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 TRIM60Q495X7 471 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 TTC31Q49AM3 519 aaPredicted RBP5.95□□□□□ -1.46
PFDN5-209ENST00000550069 MIER3Q7Z3K6 550 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 ZNF410Q86VK4 478 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 RASSF3Q86WH2 238 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 RAB11FIP4Q86YS3 637 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 PALM2Q8IXS6 379 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 TDHQ8IZJ6 230 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 NECAB1Q8N987 351 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 ANKRD53Q8N9V6 530 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 SLC17A8Q8NDX2 589 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 ANKRD20A12PQ8NF67 263 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 DIS3LQ8TF46 1054 aaKnown RBP5.95□□□□□ -1.46
PFDN5-209ENST00000550069 SAMD11Q96NU1 681 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 MTMR9Q96QG7 549 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 PRO3102Q9H379 93 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 HIPK3Q9H422 1215 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 IL23AQ9NPF7 189 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 PUF60Q9UHX1 559 aaKnown RBP5.95□□□□□ -1.46
PFDN5-209ENST00000550069 EVLQ9UI08 416 aaPredicted RBP5.95□□□□□ -1.46
PFDN5-209ENST00000550069 CFAP45Q9UL16 551 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 APOBEC2Q9Y235 224 aaKnown RBP5.95□□□□□ -1.46
PFDN5-209ENST00000550069 ATP11BQ9Y2G3 1177 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 DDX49Q9Y6V7 483 aaKnown RBP5.95□□□□□ -1.46
PFDN5-209ENST00000550069 V9GYY5 206 aaPredicted RBP5.95□□□□□ -1.46
PFDN5-209ENST00000550069 ARID2Q68CP9 1835 aa5.95□□□□□ -1.46
PFDN5-209ENST00000550069 ZMYM2Q9UBW7 1377 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 CCDC189A1A4V9 331 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 MYADML2A6NDP7 307 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 H0YCG3 227 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 PQBP1O60828 265 aaKnown RBP5.94□□□□□ -1.46
PFDN5-209ENST00000550069 PRKD3O94806 890 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 SMIM10L2AP0DMW4 78 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 SMIM10L2BP0DMW5 78 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 ARP10275 920 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 LONP1P36776 959 aaKnown RBP5.94□□□□□ -1.46
PFDN5-209ENST00000550069 BPIFB4P59827 614 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 BEX3Q00994 111 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 CD69Q07108 199 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 ST3GAL1Q11201 340 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 FOXL1Q12952 345 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 PPFIA1Q13136 1202 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 ITGB3BPQ13352 177 aaPredicted RBP5.94□□□□□ -1.46
PFDN5-209ENST00000550069 BIRC2Q13490 618 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 RIN1Q13671 783 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 MXD4Q14582 209 aaPredicted RBP5.94□□□□□ -1.46
PFDN5-209ENST00000550069 KLHL40Q2TBA0 621 aa5.94□□□□□ -1.46
PFDN5-209ENST00000550069 HYIQ5T013 277 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms