RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 RABGEF1Q9UJ41 708 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 CORO1CQ9ULV4 474 aaPredicted RBP11.49□□□□□ -0.57
LINC00661-204ENST00000549354 LUC7L3O95232 432 aaKnown RBP11.49□□□□□ -0.57
LINC00661-204ENST00000549354 XKR4Q5GH76 650 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 RNASEH2BQ5TBB1 312 aaKnown RBP11.49□□□□□ -0.57
LINC00661-204ENST00000549354 WDTC1Q8N5D0 677 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 PNPLA1Q8N8W4 532 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 FAM149B1Q96BN6 582 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 APOL2Q9BQE5 337 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 NMUR2Q9GZQ4 415 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 SDCBP2Q9H190 292 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 CYTH4Q9UIA0 394 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 SMG5Q9UPR3 1016 aaKnown RBP11.49□□□□□ -0.57
LINC00661-204ENST00000549354 B2RBV5 119 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 TXNDC9O14530 226 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 VCPP55072 806 aaKnown RBP11.48□□□□□ -0.57
LINC00661-204ENST00000549354 SATB1Q01826 763 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 INCA1Q0VD86 236 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 PTK7Q13308 1070 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 NOTUMQ6P988 496 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 TTC39CQ8N584 583 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 TMEM35BQ8NCS4 154 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 CPT1BQ92523 772 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 SNX27Q96L92 541 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 WDR83Q9BRX9 315 aaKnown RBP11.48□□□□□ -0.57
LINC00661-204ENST00000549354 CXCL16Q9H2A7 254 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 SMYD2Q9NRG4 433 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 SCINQ9Y6U3 715 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 TRIM49D1C9J1S8 452 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 GSC2O15499 205 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 CILPO75339 1184 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 TCEA3O75764 348 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 ALDH1A1P00352 501 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 CRYBB1P53674 252 aaPredicted RBP11.48□□□□□ -0.57
LINC00661-204ENST00000549354 FCGRTP55899 365 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 RBP5P82980 135 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 GRIK3Q13003 919 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 FAM219BQ5XKK7 198 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 CDHR3Q6ZTQ4 885 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 CTU1Q7Z7A3 348 aaKnown RBP11.48□□□□□ -0.57
LINC00661-204ENST00000549354 RCOR2Q8IZ40 523 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 PDIK1LQ8N165 341 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 RNF148Q8N7C7 305 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 PGBD4Q96DM1 585 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 THTPAQ9BU02 230 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 TAS2R1Q9NYW7 299 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 CNTN3Q9P232 1028 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 IP6K2Q9UHH9 426 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 C17orf102A2RUQ5 167 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 ALOX15BO15296 676 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 TREHO43280 583 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 LYPLA1O75608 230 aaPredicted RBP11.48□□□□□ -0.57
LINC00661-204ENST00000549354 RNF8O76064 485 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 SORBS2O94875 1100 aaKnown RBP11.48□□□□□ -0.57
LINC00661-204ENST00000549354 CALB1P05937 261 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 MYL3P08590 195 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 ATP6V1C1P21283 382 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 MIPP30301 263 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 PGM1P36871 562 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 NEK3P51956 506 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 ARL4CP56559 192 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 SNX17Q15036 470 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 TFDP3Q5H9I0 405 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 PPP1R15BQ5SWA1 713 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 ZIC5Q96T25 663 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 DPP3Q9NY33 737 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 MFHAS1Q9Y4C4 1052 aa11.48□□□□□ -0.57
LINC00661-204ENST00000549354 PDCD11Q14690 1871 aaKnown RBP11.48□□□□□ -0.57
LINC00661-204ENST00000549354 hCG_1818297A0A087WSY0 165 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 PDGFRAP16234 1089 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 TFE3P19532 575 aaPredicted RBP11.47□□□□□ -0.57
LINC00661-204ENST00000549354 ADORA2BP29275 332 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 SKIV2L2P42285 1042 aaKnown RBP11.47□□□□□ -0.57
LINC00661-204ENST00000549354 BEX3Q00994 111 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 PARP6Q2NL67 630 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 CCNYQ8ND76 341 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 RBM41Q96IZ5 413 aaKnown RBP11.47□□□□□ -0.57
LINC00661-204ENST00000549354 DCLRE1BQ9H816 532 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 KLK14Q9P0G3 267 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 SCN10AQ9Y5Y9 1956 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 CXorf49A8MYA2 514 aaPredicted RBP11.47□□□□□ -0.57
LINC00661-204ENST00000549354 FCHO1O14526 889 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 PRPF4O43172 522 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC00661-204ENST00000549354 CCDC22O60826 627 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 ATP5HO75947 161 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 NPTXRO95502 500 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 P4HA1P13674 534 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 LMNB2Q03252 620 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 CATSPER4Q7RTX7 472 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 ATP11CQ8NB49 1132 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 SLC4A11Q8NBS3 891 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 ADAM32Q8TC27 787 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 DNAJB3Q8WWF6 145 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 HPDLQ96IR7 371 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 TTC25Q96NG3 672 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 BTBD10Q9BSF8 475 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 PAPOLBQ9NRJ5 636 aaKnown RBP11.47□□□□□ -0.57
LINC00661-204ENST00000549354 STOML1Q9UBI4 398 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 LRRC42Q9Y546 428 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 ACTL7BQ9Y614 415 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms