RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 CIB2O75838 187 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 ADH1CP00326 375 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 ATP4AP20648 1035 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 RFC1P35251 1148 aaPredicted RBP12.04□□□□□ -0.48
VDR-206ENST00000549336 POLR2LP62875 67 aaKnown RBP12.04□□□□□ -0.48
VDR-206ENST00000549336 TAF10Q12962 218 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 ZC3H12AQ5D1E8 599 aaKnown RBP12.04□□□□□ -0.48
VDR-206ENST00000549336 MRNIPQ6NTE8 343 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 LRRC1Q9BTT6 524 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 PLAAQ9Y263 795 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 ESYT3A0FGR9 886 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 TBC1D3BA6NDS4 549 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 TSPAN3O60637 253 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 HIST1H2AGP0C0S8 130 aaPredicted RBP12.04□□□□□ -0.48
VDR-206ENST00000549336 HIST1H2ADP20671 130 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 MRPS25P82663 173 aaKnown RBP12.04□□□□□ -0.48
VDR-206ENST00000549336 ZNF284Q2VY69 593 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 SYTL3Q4VX76 610 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 SLC25A41Q8N5S1 370 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 HIST1H2AHQ96KK5 128 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 HIST1H2AJQ99878 128 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 H2AFJQ9BTM1 129 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 DRC3Q9H069 523 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 ISCUQ9H1K1 167 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 MFSD1Q9H3U5 465 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 FAM96AQ9H5X1 160 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 RBM12Q9NTZ6 932 aaKnown RBP12.04□□□□□ -0.48
VDR-206ENST00000549336 ARHGEF38Q9NXL2 777 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 UBA2Q9UBT2 640 aaPredicted RBP12.04□□□□□ -0.48
VDR-206ENST00000549336 VANGL2Q9ULK5 521 aa12.04□□□□□ -0.48
VDR-206ENST00000549336 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.04□□□□□ -0.48
VDR-206ENST00000549336 CACNA1SQ13698 1873 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 CLDN5O00501 218 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 ENPP3O14638 875 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 TBC1D4O60343 1298 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 MMP8P22894 467 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 SPRP35270 261 aaPredicted RBP12.03□□□□□ -0.48
VDR-206ENST00000549336 NNTQ13423 1086 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 FASTKD1Q53R41 847 aaKnown RBP12.03□□□□□ -0.48
VDR-206ENST00000549336 GKAP1Q5VSY0 366 aaPredicted RBP12.03□□□□□ -0.48
VDR-206ENST00000549336 ERAP2Q6P179 960 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 IRF2BP2Q7Z5L9 587 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 TFAP2DQ7Z6R9 452 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 SPDYE1Q8NFV5 336 aaPredicted RBP12.03□□□□□ -0.48
VDR-206ENST00000549336 CAPS2Q9BXY5 557 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 ZYG11BQ9C0D3 744 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 CRLS1Q9UJA2 301 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 NCKAP1Q9Y2A7 1128 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 DUSP10Q9Y6W6 482 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 ADGRA3Q8IWK6 1321 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 SHANK3Q9BYB0 1731 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 RBAK-RBAKDNI3L0D1 243 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 STAMBPL1Q96FJ0 436 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 ERVK-5Q9HDB9 667 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 NOVA2Q9UNW9 492 aaKnown RBP12.03□□□□□ -0.48
VDR-206ENST00000549336 COL24A1Q17RW2 1714 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 CTIFO43310 598 aaKnown RBP12.03□□□□□ -0.48
VDR-206ENST00000549336 HTR7P34969 479 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 KCNJ1P48048 391 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 RAD23BP54727 409 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 SPARCL1Q14515 664 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 SLC25A52Q3SY17 297 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 TIGD5Q53EQ6 642 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 GPR158Q5T848 1215 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 KCTD16Q68DU8 428 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 PDE12Q6L8Q7 609 aaKnown RBP12.03□□□□□ -0.48
VDR-206ENST00000549336 NLRP9Q7RTR0 991 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 TBC1D19Q8N5T2 526 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 N4BP2L2Q92802 583 aaPredicted RBP12.03□□□□□ -0.48
VDR-206ENST00000549336 SKA1Q96BD8 255 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 TGS1Q96RS0 853 aaKnown RBP12.03□□□□□ -0.48
VDR-206ENST00000549336 MBLAC1A4D2B0 266 aaPredicted RBP12.03□□□□□ -0.48
VDR-206ENST00000549336 APOC4-APOC2K7ER74 178 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 TTC4O95801 387 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 APOC2P02655 101 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 C8AP07357 584 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 VCPP55072 806 aaKnown RBP12.03□□□□□ -0.48
VDR-206ENST00000549336 TTLL9Q3SXZ7 439 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 MAP3K21Q5TCX8 1036 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 SH3KBP1Q96B97 665 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 ULK4Q96C45 1275 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 EGFL8Q99944 293 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 UPF3AQ9H1J1 476 aaKnown RBP12.03□□□□□ -0.48
VDR-206ENST00000549336 NT5MQ9NPB1 228 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 COMMD8Q9NX08 183 aa12.03□□□□□ -0.48
VDR-206ENST00000549336 MAP4P27816 1152 aaKnown RBP12.02□□□□□ -0.48
VDR-206ENST00000549336 HSPA9P38646 679 aaKnown RBP12.02□□□□□ -0.48
VDR-206ENST00000549336 ATP1A2P50993 1020 aa12.02□□□□□ -0.48
VDR-206ENST00000549336 PTRHD1Q6GMV3 140 aaKnown RBP12.02□□□□□ -0.48
VDR-206ENST00000549336 GPATCH11Q8N954 259 aa12.02□□□□□ -0.48
VDR-206ENST00000549336 FNIP1Q8TF40 1166 aa12.02□□□□□ -0.48
VDR-206ENST00000549336 LRRC40Q9H9A6 602 aa12.02□□□□□ -0.48
VDR-206ENST00000549336 NUDT5Q9UKK9 219 aa12.02□□□□□ -0.48
VDR-206ENST00000549336 SCNN1BP51168 640 aa12.02□□□□□ -0.49
VDR-206ENST00000549336 GNGT1P63211 74 aa12.02□□□□□ -0.49
VDR-206ENST00000549336 NYAP1Q6ZVC0 841 aa12.02□□□□□ -0.49
VDR-206ENST00000549336 SLC26A9Q7LBE3 791 aa12.02□□□□□ -0.49
VDR-206ENST00000549336 PPP1R16AQ96I34 528 aa12.02□□□□□ -0.49
VDR-206ENST00000549336 BTN2A3PQ96KV6 586 aa12.02□□□□□ -0.49
VDR-206ENST00000549336 TRIM51Q9BSJ1 452 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms