RNA–Protein interactions for RNA: ENST00000546590.2

TMTC2-202, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 4,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-202ENST00000546590 SENP1Q9P0U3 644 aa8.72□□□□□ -1.01
TMTC2-202ENST00000546590 ZMYND8Q9ULU4 1186 aaPredicted RBP8.72□□□□□ -1.01
TMTC2-202ENST00000546590 ADAMTSL1Q8N6G6 1762 aa8.71□□□□□ -1.01
TMTC2-202ENST00000546590 DOCK2Q92608 1830 aa8.71□□□□□ -1.01
TMTC2-202ENST00000546590 UBA6A0AVT1 1052 aaPredicted RBP8.71□□□□□ -1.01
TMTC2-202ENST00000546590 TPP1O14773 563 aa8.71□□□□□ -1.01
TMTC2-202ENST00000546590 STAMBPO95630 424 aa8.71□□□□□ -1.01
TMTC2-202ENST00000546590 SPOUT1Q5T280 376 aaKnown RBP8.71□□□□□ -1.01
TMTC2-202ENST00000546590 NOTUMQ6P988 496 aa8.71□□□□□ -1.01
TMTC2-202ENST00000546590 TEX9Q8N6V9 391 aa8.71□□□□□ -1.01
TMTC2-202ENST00000546590 PLD5Q8N7P1 536 aa8.71□□□□□ -1.01
TMTC2-202ENST00000546590 ST6GALNAC4Q9H4F1 302 aa8.71□□□□□ -1.01
TMTC2-202ENST00000546590 DDX43Q9NXZ2 648 aaKnown RBP8.71□□□□□ -1.01
TMTC2-202ENST00000546590 NKX1-2Q9UD57 310 aaPredicted RBP8.71□□□□□ -1.01
TMTC2-202ENST00000546590 KPNA7A9QM74 516 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 C2CD2LO14523 706 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 TNPO2O14787 897 aaKnown RBP8.71□□□□□ -1.02
TMTC2-202ENST00000546590 ALOX15BO15296 676 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 PLA2G6O60733 806 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 GHRP10912 638 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 BDNFP23560 247 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 CCND1P24385 295 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 IVDP26440 423 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 ART3Q13508 389 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 TRIP10Q15642 601 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 SPATA24Q86W54 205 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 EIF1ADQ8N9N8 165 aaKnown RBP8.71□□□□□ -1.02
TMTC2-202ENST00000546590 PHF21BQ96EK2 531 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 STOML1Q9UBI4 398 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 RABGEF1Q9UJ41 708 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 NVLO15381 856 aaKnown RBP8.71□□□□□ -1.02
TMTC2-202ENST00000546590 RASSF9O75901 435 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 SLC25A27O95847 323 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 TAF6P49848 677 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 ZNF143P52747 638 aaPredicted RBP8.71□□□□□ -1.02
TMTC2-202ENST00000546590 HUNKP57058 714 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 SLC6A3Q01959 620 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 OCRLQ01968 901 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 ZNF268Q14587 947 aaPredicted RBP8.71□□□□□ -1.02
TMTC2-202ENST00000546590 C6orf89Q6UWU4 347 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 PIGWQ7Z7B1 504 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 FAM13CQ8NE31 585 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 PCDH19Q8TAB3 1148 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 SKA2Q8WVK7 121 aaPredicted RBP8.71□□□□□ -1.02
TMTC2-202ENST00000546590 APBA2Q99767 749 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 EBF4Q9BQW3 602 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 PDZD7Q9H5P4 517 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 PIF1Q9H611 641 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 PCDH18Q9HCL0 1135 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 ADARB2Q9NS39 739 aaKnown RBP8.71□□□□□ -1.02
TMTC2-202ENST00000546590 C15orf41Q9Y2V0 281 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 CLUHO75153 1309 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 PAPPAQ13219 1627 aa8.71□□□□□ -1.02
TMTC2-202ENST00000546590 MAGEB2O15479 319 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 TREHO43280 583 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 XPOTO43592 962 aaKnown RBP8.7□□□□□ -1.02
TMTC2-202ENST00000546590 EDF1O60869 148 aaKnown RBP8.7□□□□□ -1.02
TMTC2-202ENST00000546590 OR4Q2P0C623 313 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 TGFB3P10600 412 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 PKNOX1P55347 436 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 MBTD1Q05BQ5 628 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 CYP1B1Q16678 543 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 PPP1R2P3Q6NXS1 205 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 ILDR2Q71H61 639 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.7□□□□□ -1.02
TMTC2-202ENST00000546590 HTR3CQ8WXA8 447 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 FAM193BQ96PV7 902 aaPredicted RBP8.7□□□□□ -1.02
TMTC2-202ENST00000546590 NRDE2Q9H7Z3 1164 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 PNPOQ9NVS9 261 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 ABT1Q9ULW3 272 aaKnown RBP8.7□□□□□ -1.02
TMTC2-202ENST00000546590 TTC24A2A3L6 582 aaPredicted RBP8.7□□□□□ -1.02
TMTC2-202ENST00000546590 CSH1P0DML2 217 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 CSH2P0DML3 217 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 ATP6V1B1P15313 513 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 THPOP40225 353 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 MAXP61244 160 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 PRPSAP1Q14558 356 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 PDK4Q16654 411 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 CERCAMQ5T4B2 595 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 PDZD4Q76G19 769 aaPredicted RBP8.7□□□□□ -1.02
TMTC2-202ENST00000546590 EXOC8Q8IYI6 725 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 GSDMBQ8TAX9 411 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 CCDC97Q96F63 343 aaPredicted RBP8.7□□□□□ -1.02
TMTC2-202ENST00000546590 OXNAD1Q96HP4 312 aaPredicted RBP8.7□□□□□ -1.02
TMTC2-202ENST00000546590 TNIP3Q96KP6 325 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 ZNF518BQ9C0D4 1074 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 WWP1Q9H0M0 922 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 WDCPQ9H6R7 721 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 TMEM134Q9H6X4 195 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 GRID1Q9ULK0 1009 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 NCF1BA6NI72 391 aaPredicted RBP8.7□□□□□ -1.02
TMTC2-202ENST00000546590 NCF1CA8MVU1 366 aaPredicted RBP8.7□□□□□ -1.02
TMTC2-202ENST00000546590 PRR5-ARHGAP8B1AHC4 643 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 C9JVG2 144 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 CILPO75339 1184 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 PROCP04070 461 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 ITGAVP06756 1048 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 FAM200BP0CF97 657 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 SKIP12755 728 aa8.7□□□□□ -1.02
TMTC2-202ENST00000546590 NCF1P14598 390 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms