RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 POLG2Q9UHN1 485 aa12.86□□□□□ -0.35
COL4A6-209ENST00000545689 INSRRP14616 1297 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 ALDH7A1P49419 539 aaKnown RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 RTP1P59025 263 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 CLPBQ9H078 707 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 CAAP1Q9H8G2 361 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 UBIAD1Q9Y5Z9 338 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 A0A087X1B8 175 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 SIGLEC16A6NMB1 481 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 DDHD2O94830 711 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 WDR47O94967 919 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 LRG1P02750 347 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 NUDT17P0C025 328 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 RHBDL3P58872 404 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 KCNMB4Q86W47 210 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 NMRAL1Q9HBL8 299 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 ZSCAN5CA6NGD5 496 aaPredicted RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 WDR59Q6PJI9 974 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 TMEM86AQ8N2M4 240 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 TSEN2Q8NCE0 465 aaKnown RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 ZNF75CPQ92670 426 aaPredicted RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 PPP1R10Q96QC0 940 aaKnown RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 THUMPD3Q9BV44 507 aaKnown RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 SLC25A13Q9UJS0 675 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 DNPEPQ9ULA0 475 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 FCHO1O14526 889 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 XPO1O14980 1071 aaKnown RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 MAP3K13O43283 966 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 SNUPNO95149 360 aaKnown RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 ASS1P00966 412 aaKnown RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 TFE3P19532 575 aaPredicted RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 KRR1Q13601 381 aaKnown RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 DPYSL3Q14195 570 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 NBPF12Q5TAG4 269 aaPredicted RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 CCDC60Q8IWA6 550 aaPredicted RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 EPS8L2Q9H6S3 715 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 TLR8Q9NR97 1041 aaKnown RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 DDX43Q9NXZ2 648 aaKnown RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 H2AFY2Q9P0M6 372 aaPredicted RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 RABGEF1Q9UJ41 708 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 BCL9LQ86UU0 1499 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 SNTNA6NMZ2 147 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 TBC1D12O60347 775 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 IFNA14P01570 189 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 BMP6P22004 513 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 KDELR1P24390 212 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 ATXN3P54252 364 aaPredicted RBP12.85□□□□□ -0.35
COL4A6-209ENST00000545689 HPCAP84074 193 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 TP53BP2Q13625 1128 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 TTMPQ5BVD1 217 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 CKAP2Q8WWK9 683 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 ART4Q93070 314 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 SERPINB11Q96P15 392 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 TRPM5Q9NZQ8 1165 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 ADAM28Q9UKQ2 775 aa12.85□□□□□ -0.35
COL4A6-209ENST00000545689 ANKRD63C9JTQ0 380 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 PLA2G6O60733 806 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 PAX3P23760 479 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 CYP2C18P33260 490 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 PBX1P40424 430 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 CLK1P49759 484 aaKnown RBP12.84□□□□□ -0.35
COL4A6-209ENST00000545689 NAA20P61599 178 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 MSLNQ13421 630 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-209ENST00000545689 BFSP2Q13515 415 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 PHF13Q86YI8 300 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-209ENST00000545689 RBAK-RBAKDNI3L0D1 243 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 HUNKP57058 714 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 CNTN1Q12860 1018 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 MRPL28Q13084 256 aaKnown RBP12.84□□□□□ -0.35
COL4A6-209ENST00000545689 BMPR2Q13873 1038 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 CTXN3Q4LDR2 81 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 PALB2Q86YC2 1186 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 C12orf56Q8IXR9 622 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 PHACTR1Q9C0D0 580 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 NRDE2Q9H7Z3 1164 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 ENO4A6NNW6 628 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 LACTBL1A8MY62 500 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 RHOCP08134 193 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 ITGB3BPQ13352 177 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-209ENST00000545689 PARP6Q2NL67 630 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 RNF43Q68DV7 783 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 TAF2Q6P1X5 1199 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 ZNF786Q8N393 782 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 CASP10Q92851 521 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 TSPAN18Q96SJ8 248 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 KRCC1Q9NPI7 259 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-209ENST00000545689 SNTG2Q9NY99 539 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 PRG3Q9Y2Y8 225 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-209ENST00000545689 WDR27A2RRH5 827 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 SAC3D1A6NKF1 404 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 CELF2O95319 508 aaKnown RBP12.84□□□□□ -0.35
COL4A6-209ENST00000545689 MIPP30301 263 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 IFI35P80217 286 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-209ENST00000545689 SLC45A4Q5BKX6 768 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 LNX1Q8TBB1 728 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-209ENST00000545689 CTNNAL1Q9UBT7 734 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 UMODL1Q5DID0 1318 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 SOX10P56693 466 aa12.84□□□□□ -0.35
COL4A6-209ENST00000545689 MAMLD1Q13495 774 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms