RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 DGKHQ86XP1 1220 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 FMNL3Q8IVF7 1028 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 CCDC33Q8N5R6 958 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 RNF152Q8N8N0 203 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 ABHD5Q8WTS1 349 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 PIGKQ92643 395 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 TTC17Q96AE7 1141 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 GJB4Q9NTQ9 266 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 ZBTB40Q9NUA8 1239 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 TMEM45AQ9NWC5 275 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-224ENST00000545688 PRYO14603 147 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 COQ9O75208 318 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 TULP3O75386 442 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 OAZ2O95190 189 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 ST6GAL1P15907 406 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 TSHRP16473 764 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 RPS6KB1P23443 525 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 DUSP1P28562 367 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 MTA1Q13330 715 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 GAB1Q13480 694 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 TMEM196Q5HYL7 178 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 FAM90A2PQ658T7 463 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 MPLKIPQ8TAP9 179 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 AKAP1Q92667 903 aaKnown RBP eCLIP5.5□□□□□ -1.53
SNHG1-224ENST00000545688 P2RY11Q96G91 374 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 GATA5Q9BWX5 397 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-224ENST00000545688 RNF26Q9BY78 433 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-224ENST00000545688 ASNSD1Q9NWL6 643 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 TMOD4Q9NZQ9 345 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 BICRAQ9NZM4 1560 aa5.5□□□□□ -1.53
SNHG1-224ENST00000545688 KCNQ3O43525 872 aa5.49□□□□□ -1.53
SNHG1-224ENST00000545688 CRYABP02511 175 aaKnown RBP5.49□□□□□ -1.53
SNHG1-224ENST00000545688 MYL4P12829 197 aa5.49□□□□□ -1.53
SNHG1-224ENST00000545688 TNFRSF1BP20333 461 aa5.49□□□□□ -1.53
SNHG1-224ENST00000545688 NDUFS1P28331 727 aa5.49□□□□□ -1.53
SNHG1-224ENST00000545688 TKTP29401 623 aaKnown RBP5.49□□□□□ -1.53
SNHG1-224ENST00000545688 IGHMBP2P38935 993 aaKnown RBP5.49□□□□□ -1.53
SNHG1-224ENST00000545688 CASP5P51878 434 aa5.49□□□□□ -1.53
SNHG1-224ENST00000545688 B4GALNT1Q00973 533 aa5.49□□□□□ -1.53
SNHG1-224ENST00000545688 CRELD2Q6UXH1 353 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-224ENST00000545688 KIAA0408Q6ZU52 694 aa5.49□□□□□ -1.53
SNHG1-224ENST00000545688 FAM57BQ71RH2 274 aa5.49□□□□□ -1.53
SNHG1-224ENST00000545688 CCDC28AQ8IWP9 274 aa5.49□□□□□ -1.53
SNHG1-224ENST00000545688 MMP21Q8N119 569 aa5.49□□□□□ -1.53
SNHG1-224ENST00000545688 MAGEB5Q9BZ81 275 aa5.49□□□□□ -1.53
SNHG1-224ENST00000545688 MYO1AQ9UBC5 1043 aa5.49□□□□□ -1.53
SNHG1-224ENST00000545688 B4DGG1 531 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 ALPLP05186 524 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 SLC5A2P31639 672 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 CCKBRP32239 447 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 HOXD12P35452 270 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 SLC12A2P55011 1212 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 RUSC1-AS1Q66K80 236 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 RAP1GAP2Q684P5 730 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 MRNIPQ6NTE8 343 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 USP17L6PQ6QN14 398 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 CCDC150Q8NCX0 1101 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 BCAS4Q8TDM0 211 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 CELF1Q92879 486 aaKnown RBP5.48□□□□□ -1.53
SNHG1-224ENST00000545688 SENP7Q9BQF6 1050 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 FAM234AQ9H0X4 552 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 TMEM8AQ9HCN3 771 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 SEMA4BQ9NPR2 832 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-224ENST00000545688 ZNF580Q9UK33 172 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 FAM50BQ9Y247 325 aa5.48□□□□□ -1.53
SNHG1-224ENST00000545688 A0A1W2PPC4 97 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 TTC34A8MYJ7 566 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 ZSCAN9O15535 394 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-224ENST00000545688 USP12O75317 370 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 SLC3A2P08195 630 aaKnown RBP5.47□□□□□ -1.53
SNHG1-224ENST00000545688 FGF2P09038 288 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 SLC5A1P13866 664 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 MATN1P21941 496 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 PRIM2P49643 509 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 SEMA3BQ13214 749 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.47□□□□□ -1.53
SNHG1-224ENST00000545688 KYAT3Q6YP21 454 aaKnown RBP5.47□□□□□ -1.53
SNHG1-224ENST00000545688 C9orf47Q6ZRZ4 202 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 BEND5Q7L4P6 421 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 RFX6Q8HWS3 928 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 UEVLDQ8IX04 471 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 CLASRPQ8N2M8 674 aaKnown RBP5.47□□□□□ -1.53
SNHG1-224ENST00000545688 PCDHAC1Q9H158 963 aa5.47□□□□□ -1.53
SNHG1-224ENST00000545688 MOV10Q9HCE1 1003 aaKnown RBP5.47□□□□□ -1.53
SNHG1-224ENST00000545688 ZMYND8Q9ULU4 1186 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-224ENST00000545688 IGKV2D-30A0A075B6S6 120 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 CCDC187A0A096LP49 1063 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 IGLV5-39A0A0G2JS06 123 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 ZNF814B7Z6K7 855 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 F8W810 466 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 APOL1O14791 398 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 ALADP13716 330 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 TFEBP19484 476 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 MMP8P22894 467 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 GABRB3P28472 473 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 CCKARP32238 428 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 STT3AP46977 705 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 SOX2P48431 317 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 THBS3P49746 956 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms