RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 DENND5BQ6ZUT9 1274 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 TMC7Q7Z402 723 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 POLNQ7Z5Q5 900 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 ADGRD2Q7Z7M1 963 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 SPATS2Q86XZ4 545 aaKnown RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 KATNAL2Q8IYT4 538 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 C12orf50Q8NA57 414 aaPredicted RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 TSEN2Q8NCE0 465 aaKnown RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 CMASQ8NFW8 434 aaPredicted RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 VN1R2Q8NFZ6 395 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 DQX1Q8TE96 717 aaKnown RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 GIPC2Q8TF65 315 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 FAM172AQ8WUF8 416 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 RAPGEF5Q92565 580 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 SLCO2A1Q92959 643 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 FAM149B1Q96BN6 582 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 ATP6V1G3Q96LB4 118 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 ZNF334Q9HCZ1 680 aaPredicted RBP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 TMPRSS4Q9NRS4 437 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 PLSCR2Q9NRY7 297 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 KLHL11Q9NVR0 708 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 NEU3Q9UQ49 428 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 USTQ9Y2C2 406 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 C5orf42Q9H799 3197 aa7.29□□□□□ -1.24
HMGCS2-204ENST00000544913 XIRP2A4UGR9 3374 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 MTCL1Q9Y4B5 1905 aaKnown RBP7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 UNC80Q8N2C7 3258 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 NDC80O14777 642 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 CLASP2O75122 1294 aaKnown RBP7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 TRUB2O95900 331 aaKnown RBP7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 CD48P09326 243 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 RARAP10276 462 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 IL4RP24394 825 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 SDC4P31431 198 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 NOS2P35228 1153 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 GYS2P54840 703 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 SNX16P57768 344 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 YWHAGP61981 247 aaKnown RBP eCLIP7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 CREMQ03060 361 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 CAV1Q03135 178 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 TAF10Q12962 218 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 KLF1Q13351 362 aaPredicted RBP7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 SLMAPQ14BN4 828 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 ACAP1Q15027 740 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 SMTNL2Q2TAL5 461 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 DCAF6Q58WW2 860 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 SNX30Q5VWJ9 437 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 DUPD1Q68J44 220 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 KDM7AQ6ZMT4 941 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 STRADAQ7RTN6 431 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 HOOK3Q86VS8 718 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 SLC13A5Q86YT5 568 aaPredicted RBP7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 TMC8Q8IU68 726 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 TDHQ8IZJ6 230 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 CNPY4Q8N129 248 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 CCDC185Q8N715 623 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 ADAM32Q8TC27 787 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 GRK7Q8WTQ7 553 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 GDPD5Q8WTR4 605 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 CASP10Q92851 521 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 MAGOHBQ96A72 148 aaKnown RBP7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 TRMT2BQ96GJ1 504 aaKnown RBP7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 FMO2Q99518 471 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 SMOC2Q9H3U7 446 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 LRRC19Q9H756 370 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 CERS4Q9HA82 394 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 CYP4F11Q9HBI6 524 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 GPATCH2LQ9NWQ4 482 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 MAFFQ9ULX9 164 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 BRWD1Q9NSI6 2320 aa7.28□□□□□ -1.24
HMGCS2-204ENST00000544913 PRUNE2Q8WUY3 3088 aa7.27□□□□□ -1.24
HMGCS2-204ENST00000544913 ESYT3A0FGR9 886 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 PI4K2BG5E9Z4 385 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 TTI1O43156 1089 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 MSI1O43347 362 aaKnown RBP7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 PPFIA2O75334 1257 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 CSPG5O95196 566 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 TBX18O95935 607 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 ADH1AP07327 375 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 FAM153BP0C7A2 387 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 EPCAMP16422 314 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 YWHAQP27348 245 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 ECHS1P30084 290 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 HSD17B3P37058 310 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 CDKN2BP42772 138 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 TUFMP49411 452 aaKnown RBP7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 CXCR3P49682 368 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 IRAK1P51617 712 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 RPL10AP62906 217 aaKnown RBP7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 LMNB2Q03252 620 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 TWF1Q12792 350 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 SEMA3BQ13214 749 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 CDO1Q16878 200 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 FAM153CQ494X1 144 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 KCNT1Q5JUK3 1230 aa7.27□□□□□ -1.25
HMGCS2-204ENST00000544913 MFSD7Q6UXD7 560 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms