RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 TMCO1Q9UM00 188 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 ST3GAL5Q9UNP4 418 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 FARP1Q9Y4F1 1045 aaPredicted RBP15.54■□□□□ 0.08
CHFR-223ENST00000544268 SLC4A7Q9Y6M7 1214 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 FAM47DPA6NHR8 397 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 CABYRO75952 493 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 ASMTLO95671 621 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 ITGAVP06756 1048 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 NAT1P18440 290 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 CETN2P41208 172 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 PRMT2P55345 433 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 TWF2Q6IBS0 349 aaKnown RBP15.54■□□□□ 0.08
CHFR-223ENST00000544268 ALKAL1Q6UXT8 129 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 LCA5Q86VQ0 697 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 RFX6Q8HWS3 928 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 KCTD6Q8NC69 237 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 BBOF1Q8ND07 529 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 TTC8Q8TAM2 541 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 LRRC8CQ8TDW0 803 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 MAGEB18Q96M61 343 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 CFAP57Q96MR6 1250 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 PPP1R12CQ9BZL4 782 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 IQCGQ9H095 443 aaKnown RBP15.54■□□□□ 0.08
CHFR-223ENST00000544268 KLK14Q9P0G3 267 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 IPPQ9Y573 584 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 RALGAPA2Q2PPJ7 1873 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 C1QTNF8P60827 252 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 YWHAEP62258 255 aaKnown RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 PTPN11Q06124 597 aaPredicted RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 MORF4L2Q15014 288 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 HIF1AQ16665 826 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 FAM102AQ5T9C2 384 aaPredicted RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 DRICH1Q6PGQ1 229 aaPredicted RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 NT5DC4Q86YG4 428 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 NIPA2Q8N8Q9 360 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 SMG8Q8ND04 991 aaKnown RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 GATA6Q92908 595 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 HEXIM2Q96MH2 286 aaKnown RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 GLT1D1Q96MS3 346 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 BCO2Q9BYV7 579 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 DENND2DQ9H6A0 471 aaPredicted RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 PCDH9Q9HC56 1237 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 UBN1Q9NPG3 1134 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 HAO1Q9UJM8 370 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 ITGA11Q9UKX5 1188 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 MOXD2PA6NHM9 499 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 PPEF2O14830 753 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 ALOX15BO15296 676 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 BASP1P80723 227 aaKnown RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 BBS9Q3SYG4 887 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 FAXCQ5TGI0 409 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 ARHGEF18Q6ZSZ5 1173 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 DENND1AQ8TEH3 1009 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 C18orf25Q96B23 403 aaPredicted RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 SLC7A6OSQ96CW6 309 aaPredicted RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 HPDLQ96IR7 371 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 CCDC77Q9BR77 488 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 TRIM56Q9BRZ2 755 aaKnown RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 PITPNM3Q9BZ71 974 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 AGO3Q9H9G7 860 aaKnown RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 CNTN3Q9P232 1028 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 TUBGCP4Q9UGJ1 667 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 RABGEF1Q9UJ41 708 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 NOD1Q9Y239 953 aa15.53■□□□□ 0.08
CHFR-223ENST00000544268 DRG1Q9Y295 367 aaKnown RBP15.53■□□□□ 0.08
CHFR-223ENST00000544268 TRAFD1O14545 582 aaPredicted RBP15.52■□□□□ 0.08
CHFR-223ENST00000544268 ENTPD5O75356 428 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 MYCP01106 439 aaPredicted RBP15.52■□□□□ 0.08
CHFR-223ENST00000544268 KRT4P19013 534 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 TARSP26639 723 aaKnown RBP15.52■□□□□ 0.08
CHFR-223ENST00000544268 ZBTB6Q15916 424 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 ACBD5Q5T8D3 534 aaPredicted RBP15.52■□□□□ 0.08
CHFR-223ENST00000544268 C1orf228Q6PIY5 440 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 C3orf62Q6ZUJ4 267 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 CYP4V2Q6ZWL3 525 aaPredicted RBP15.52■□□□□ 0.08
CHFR-223ENST00000544268 ARRDC4Q8NCT1 418 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 FBXO36Q8NEA4 188 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 ERP27Q96DN0 273 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 ARPC5LQ9BPX5 153 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 ZNF518BQ9C0D4 1074 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 MMADHCQ9H3L0 296 aaPredicted RBP15.52■□□□□ 0.08
CHFR-223ENST00000544268 USP18Q9UMW8 372 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 CHMP2BQ9UQN3 213 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 DERAQ9Y315 318 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 NUMBLQ9Y6R0 609 aa15.52■□□□□ 0.08
CHFR-223ENST00000544268 FRMPD3Q5JV73 1810 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 SCN1AP35498 2009 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 A0A1W2PQ45 241 aaPredicted RBP15.52■□□□□ 0.07
CHFR-223ENST00000544268 A0A1W2PQY0 241 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 E5RJQ4 531 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 CILPO75339 1184 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 ABHD2P08910 425 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 TFE3P19532 575 aaPredicted RBP15.52■□□□□ 0.07
CHFR-223ENST00000544268 CA4P22748 312 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 GPD2P43304 727 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 SERPINB4P48594 390 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 SCNN1BP51168 640 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 NDST1P52848 882 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 RBP5P82980 135 aa15.52■□□□□ 0.07
CHFR-223ENST00000544268 SNX30Q5VWJ9 437 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms