RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 RAB6BQ9NRW1 208 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 MFSD11O43934 449 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 METTL18O95568 372 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 USP17L7P0C7H9 530 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 BRAFP15056 766 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 ELK3P41970 407 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 DSC1Q08554 894 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 NR1H3Q13133 447 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 PRKD1Q15139 912 aaPredicted RBP14.67□□□□□ -0.06
LDB3-207ENST00000542786 PKN2Q16513 984 aaKnown RBP14.67□□□□□ -0.06
LDB3-207ENST00000542786 C4orf22Q6V702 233 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 CAPN12Q6ZSI9 719 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 SRRM1Q8IYB3 904 aaKnown RBP14.67□□□□□ -0.06
LDB3-207ENST00000542786 MCUQ8NE86 351 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 PXYLP1Q8TE99 480 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 TMEM209Q96SK2 561 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 PRMT1Q99873 361 aaKnown RBP14.67□□□□□ -0.06
LDB3-207ENST00000542786 TSEN34Q9BSV6 310 aaKnown RBP14.67□□□□□ -0.06
LDB3-207ENST00000542786 FRMD8Q9BZ67 464 aaPredicted RBP14.67□□□□□ -0.06
LDB3-207ENST00000542786 ETNK1Q9HBU6 452 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 MOXD2PA6NHM9 499 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 HACD1B0YJ81 288 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 H3BRJ5 948 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 DCLK1O15075 740 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 LTFP02788 710 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 TYMPP19971 482 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 ADRA1BP35368 520 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 CORO7P57737 925 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 DEUP1Q05D60 604 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 MTM1Q13496 603 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 PAFAH1B3Q15102 231 aaKnown RBP14.67□□□□□ -0.06
LDB3-207ENST00000542786 CLLU1OSQ5K130 101 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 FAXCQ5TGI0 409 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 DCLRE1AQ6PJP8 1040 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 PPP1R21Q6ZMI0 780 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 SPATS2Q86XZ4 545 aaKnown RBP14.67□□□□□ -0.06
LDB3-207ENST00000542786 DENND1AQ8TEH3 1009 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 FBF1Q8TES7 1133 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 IRGQQ8WZA9 623 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 FAM107BQ9H098 131 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 GPBP1L1Q9HC44 474 aaPredicted RBP14.67□□□□□ -0.06
LDB3-207ENST00000542786 DSEQ9UL01 958 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 INPP5FQ9Y2H2 1132 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 FAM169AQ9Y6X4 670 aa14.67□□□□□ -0.06
LDB3-207ENST00000542786 POC1B-GALNT4F8VUJ3 575 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 FAM72CH0Y354 149 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 AVILO75366 819 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 ARL4AP40617 200 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 SLC18A1P54219 525 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 AIF1P55008 147 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 GEMIN4P57678 1058 aaKnown RBP14.66□□□□□ -0.06
LDB3-207ENST00000542786 SEMA5AQ13591 1074 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 FAM72AQ5TYM5 149 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 FAM72DQ6L9T8 149 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 C3orf62Q6ZUJ4 267 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 PIGWQ7Z7B1 504 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 FAM72BQ86X60 149 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 LRRC34Q8IZ02 419 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 DCAKDQ8WVC6 231 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 CKAP2Q8WWK9 683 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 SEC16BQ96JE7 1060 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 PNPLA8Q9NP80 782 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 PSMC3IPQ9P2W1 217 aaPredicted RBP14.66□□□□□ -0.06
LDB3-207ENST00000542786 FBXW11Q9UKB1 542 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 CHMP2BQ9UQN3 213 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 NOD1Q9Y239 953 aa14.66□□□□□ -0.06
LDB3-207ENST00000542786 ZNF638Q14966 1978 aaKnown RBP14.66□□□□□ -0.06
LDB3-207ENST00000542786 RASA4BC9J798 803 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 PRPF4O43172 522 aaKnown RBP eCLIP14.65□□□□□ -0.06
LDB3-207ENST00000542786 RASA4O43374 803 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 TPSB2P20231 275 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 PHBP35232 272 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 WDR4P57081 412 aaKnown RBP14.65□□□□□ -0.06
LDB3-207ENST00000542786 NME3Q13232 169 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 LRRC14Q15048 493 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 TPSAB1Q15661 275 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 ADGRD1Q6QNK2 874 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 RFX8Q6ZV50 586 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 METTL23Q86XA0 190 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 CCDC33Q8N5R6 958 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 SLC7A14Q8TBB6 771 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 ADAM32Q8TC27 787 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 HASPINQ8TF76 798 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 KLC2Q9H0B6 622 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 DMAP1Q9NPF5 467 aaPredicted RBP14.65□□□□□ -0.06
LDB3-207ENST00000542786 PCDHB8Q9UN66 801 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 TTLL3Q9Y4R7 772 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 PCNTO95613 3336 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 A0A0A0MRY4 1105 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 A0A1W2PQ45 241 aaPredicted RBP14.65□□□□□ -0.06
LDB3-207ENST00000542786 A0A1W2PQY0 241 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 KBTBD13C9JR72 458 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 TMEM189-UBE2V1I3L0A0 370 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 DDHD2O94830 711 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 EOMESO95936 686 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 IGLV3-25P01717 112 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 BDNFP23560 247 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 HOXD10P28358 340 aa14.65□□□□□ -0.06
LDB3-207ENST00000542786 IFNAR2P48551 515 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms