RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 IVDP26440 423 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 GBP1P32455 592 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 OR1D2P34982 312 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 USP46P62068 366 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 SMARCB1Q12824 385 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 CALCOCO2Q13137 446 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 PSMD5Q16401 504 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 EFHC2Q5JST6 749 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 SLC9A4Q6AI14 798 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 UBE2Q1Q7Z7E8 422 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 TAC4Q86UU9 113 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 ZC3H18Q86VM9 953 aaKnown RBP11.43□□□□□ -0.58
SCG3-202ENST00000542355 PSTKQ8IV42 348 aaKnown RBP11.43□□□□□ -0.58
SCG3-202ENST00000542355 CMTR2Q8IYT2 770 aaKnown RBP11.43□□□□□ -0.58
SCG3-202ENST00000542355 RNF168Q8IYW5 571 aaPredicted RBP11.43□□□□□ -0.58
SCG3-202ENST00000542355 SLC39A11Q8N1S5 342 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 DQX1Q8TE96 717 aaKnown RBP11.43□□□□□ -0.58
SCG3-202ENST00000542355 BADQ92934 168 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 ART4Q93070 314 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 RNF34Q969K3 372 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 FAF2Q96CS3 445 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 SLC9A7Q96T83 725 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 TRIM62Q9BVG3 475 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 FBXO44Q9H4M3 255 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 VIPAS39Q9H9C1 493 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 NMUR1Q9HB89 426 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 ANLNQ9NQW6 1124 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 FAM53CQ9NYF3 392 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 OGFRQ9NZT2 677 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 MTRRQ9UBK8 725 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 SFMBT1Q9UHJ3 866 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 SCML2Q9UQR0 700 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 WDR27A2RRH5 827 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 I6L893 689 aaPredicted RBP11.43□□□□□ -0.58
SCG3-202ENST00000542355 MCF2LO15068 1137 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 CREB3O43889 395 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 FGBP02675 491 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 SOD2P04179 222 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 HAPLN1P10915 354 aaPredicted RBP11.43□□□□□ -0.58
SCG3-202ENST00000542355 ITIH2P19823 946 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 AMPD1P23109 780 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 KLRC2P26717 231 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 ARL4AP40617 200 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 GDF10P55107 478 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 ROR1Q01973 937 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 NOMO1Q15155 1222 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 ARL13BQ3SXY8 428 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 SLC8B1Q6J4K2 584 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 DENND5BQ6ZUT9 1274 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 MON1AQ86VX9 555 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 RSAD2Q8WXG1 361 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 PIK3R5Q8WYR1 880 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 SNF8Q96H20 258 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 OSER1Q9NX31 292 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 BACE2Q9Y5Z0 518 aa11.43□□□□□ -0.58
SCG3-202ENST00000542355 ZNF487B1APH4 448 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 LAG3P18627 525 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 TGM2P21980 687 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 DHX9Q08211 1270 aaKnown RBP11.42□□□□□ -0.58
SCG3-202ENST00000542355 MTMR3Q13615 1198 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 DARS2Q6PI48 645 aaKnown RBP11.42□□□□□ -0.58
SCG3-202ENST00000542355 BEND5Q7L4P6 421 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 UNC45BQ8IWX7 931 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 COLGALT1Q8NBJ5 622 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 RNF139Q8WU17 664 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 C2orf15Q8WU43 125 aaKnown RBP11.42□□□□□ -0.58
SCG3-202ENST00000542355 NTAN1Q96AB6 310 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 CLSTN3Q9BQT9 956 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 TKTL2Q9H0I9 626 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 ACBD3Q9H3P7 528 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 SPG21Q9NZD8 308 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 WHRNQ9P202 907 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 MTRF1LQ9UGC7 380 aaKnown RBP11.42□□□□□ -0.58
SCG3-202ENST00000542355 FNDC1Q4ZHG4 1894 aaPredicted RBP11.42□□□□□ -0.58
SCG3-202ENST00000542355 MICAL3Q7RTP6 2002 aa11.42□□□□□ -0.58
SCG3-202ENST00000542355 FAM72CH0Y354 149 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 H7C0C1 242 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 TP73O15350 636 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 YWHAQP27348 245 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 HSPA9P38646 679 aaKnown RBP11.41□□□□□ -0.58
SCG3-202ENST00000542355 ATP5OP48047 213 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 CXCR3P49682 368 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 ITGA8P53708 1063 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 AIF1P55008 147 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 FAM193AP78312 1265 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 GBE1Q04446 702 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 GPS1Q13098 491 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 PPIGQ13427 754 aaKnown RBP eCLIP11.41□□□□□ -0.58
SCG3-202ENST00000542355 P3H1Q32P28 736 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 FAM72AQ5TYM5 149 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 FAM72DQ6L9T8 149 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 FAM72BQ86X60 149 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 MREGQ8N565 214 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 FAM71DQ8N9W8 422 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 CCHCR1Q8TD31 782 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 LRRN4Q8WUT4 740 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 CASP10Q92851 521 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 LRRC45Q96CN5 670 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 PRM3Q9NNZ6 103 aa11.41□□□□□ -0.58
SCG3-202ENST00000542355 ETNK2Q9NVF9 386 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms