RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TAB1Q15750 504 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 ATG16L2Q8NAA4 619 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 PRDM16Q9HAZ2 1276 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 VANGL2Q9ULK5 521 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 PRR23AA6NEV1 266 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 INPP4BO15327 924 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 NPTXRO95502 500 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 VAC14Q08AM6 782 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 TIMM50Q3ZCQ8 353 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 MIIPQ5JXC2 388 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 TRIQKQ629K1 86 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.35■□□□□ 0.054e-7■■□□□ 11.7
SMARCA4-207ENST00000541122 OTOAQ7RTW8 1153 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 CLEC10AQ8IUN9 316 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 BORCS5Q969J3 196 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 FAM120BQ96EK7 910 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 ABHD8Q96I13 439 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 CHST7Q9NS84 486 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 AP4E1Q9UPM8 1137 aa15.35■□□□□ 0.05
SMARCA4-207ENST00000541122 A0A0U1RQJ8 604 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 TMEM191CA6NGB0 347 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 ADCY6O43306 1168 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 SERPINA6P08185 405 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 PDGFRBP09619 1106 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 VAV1P15498 845 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 ACAT1P24752 427 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 GNL1P36915 607 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 GRIK1P39086 918 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 NPTX2P47972 431 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 NR2C2P49116 596 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 MAD2L1Q13257 205 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 FRG1Q14331 258 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 ZNF268Q14587 947 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 DCAF4L1Q3SXM0 396 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 BROXQ5VW32 411 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 SV2AQ7L0J3 742 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 SLFN11Q7Z7L1 901 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 TMEM139Q8IV31 216 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 TBC1D16Q8TBP0 767 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 CRAMP1Q96RY5 1269 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 ZBED2Q9BTP6 218 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 C6orf62Q9GZU0 229 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 APOC4-APOC2K7ER74 178 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 EDF1O60869 148 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 APOC2P02655 101 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 BMP6P22004 513 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 ITGA1P56199 1179 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 NR1D2Q14995 579 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 CDC42EP5Q6NZY7 148 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 TTLL6Q8N841 843 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 COLGALT1Q8NBJ5 622 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 REXO4Q9GZR2 422 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 DNPEPQ9ULA0 475 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 PRPF19Q9UMS4 504 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 CD3EAPO15446 510 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 KRT6BP04259 564 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 UQCRBP14927 111 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 MSH3P20585 1137 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 KRT6CP48668 564 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 NPY2RP49146 381 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 STRIP1Q5VSL9 837 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 TTC23Q5W5X9 447 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 MFSD5Q6N075 450 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 C8orf59Q8N0T1 100 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 DEPDC7Q96QD5 511 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 CLEC4MQ9H2X3 399 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 KRT84Q9NSB2 600 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 A0A096LPK6 155 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 KRT87PA6NCN2 255 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 CENPXA8MT69 81 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 F8W810 466 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 BIRC5O15392 142 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 SLC2A3P11169 496 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 MAPK11Q15759 364 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 SLC5A9Q2M3M2 681 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 PDZK1Q5T2W1 519 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 LRRC38Q5VT99 294 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 CYP4F12Q9HCS2 524 aa15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 COL3A1P02461 1466 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-207ENST00000541122 HACD1B0YJ81 288 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 FAM25AB3EWG3 89 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 FAM25CB3EWG5 89 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 FAM25GB3EWG6 89 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 CHADO15335 359 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 SNAP91O60641 907 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 ITGB3P05106 788 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 CD151P48509 253 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 RPL14P50914 215 aaKnown RBP15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 ANXA11P50995 505 aaKnown RBP15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 BNIP1Q12981 228 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 TRIM71Q2Q1W2 868 aaKnown RBP15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 C2CD6Q53TS8 623 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 ABRAXAS1Q6UWZ7 409 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 MIER2Q8N344 545 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 ST13P5Q8NFI4 369 aaPredicted RBP15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 ACMSDQ8TDX5 336 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 SLC10A4Q96EP9 437 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 PIN4Q9Y237 131 aaKnown RBP15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 UMODL1Q5DID0 1318 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms