RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 PLIN1O60240 522 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 NTSR2O95665 410 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 ALADP13716 330 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 GAB1Q13480 694 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 ETFDHQ16134 617 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 CNGA3Q16281 694 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 P3H1Q32P28 736 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 ARL6IP4Q66PJ3 421 aaKnown RBP6.98□□□□□ -1.29
YBX3-210ENST00000540975 CCDC146Q8IYE0 955 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 PRSS3P2Q8NHM4 247 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 DENND1AQ8TEH3 1009 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 C18orf8Q96DM3 657 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 ZNF700Q9H0M5 742 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 AGO4Q9HCK5 861 aaKnown RBP6.98□□□□□ -1.29
YBX3-210ENST00000540975 FSCN3Q9NQT6 498 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 HELLSQ9NRZ9 838 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.97□□□□□ -1.29
YBX3-210ENST00000540975 PNMA6EA0A0J9YXQ4 647 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 J3KTA2 159 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 M0QZQ0 153 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 TAF5LO75529 589 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 TOP3BO95985 862 aaKnown RBP6.97□□□□□ -1.29
YBX3-210ENST00000540975 IFIT2P09913 472 aaKnown RBP6.97□□□□□ -1.29
YBX3-210ENST00000540975 TACR3P29371 465 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 MMP13P45452 471 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 YPEL5P62699 121 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 ELF2Q15723 593 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 Q4G0T1 1027 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 SYCP2LQ5T4T6 812 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 TTC30AQ86WT1 665 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 SYTL1Q8IYJ3 562 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 P2RY11Q96G91 374 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 SIGLEC11Q96RL6 698 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 EIF3CQ99613 913 aaKnown RBP6.97□□□□□ -1.29
YBX3-210ENST00000540975 TM2D2Q9BX73 214 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 ARL8BQ9NVJ2 186 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 IGSF9Q9P2J2 1179 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 PI4KBQ9UBF8 816 aa6.97□□□□□ -1.29
YBX3-210ENST00000540975 TTC34A8MYJ7 566 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 RRHO14718 337 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 NPC1O15118 1278 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 MOSPD3O75425 235 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 GLP2RO95838 553 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 MATN1P21941 496 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 HOXD12P35452 270 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 PPM1AP35813 382 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 ANO7Q6IWH7 933 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 MSANTD2Q6P1R3 559 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 KYAT3Q6YP21 454 aaKnown RBP6.96□□□□□ -1.3
YBX3-210ENST00000540975 UBE2Q1Q7Z7E8 422 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 SKAP1Q86WV1 359 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 OR52L2PQ8NGH6 319 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 AKAP1Q92667 903 aaKnown RBP eCLIP6.96□□□□□ -1.3
YBX3-210ENST00000540975 SPRTNQ9H040 489 aaPredicted RBP6.96□□□□□ -1.3
YBX3-210ENST00000540975 VPS16Q9H269 839 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 EPS8L2Q9H6S3 715 aa6.96□□□□□ -1.3
YBX3-210ENST00000540975 TUBA8Q9NY65 449 aaPredicted RBP6.96□□□□□ -1.3
YBX3-210ENST00000540975 PRYO14603 147 aa6.95□□□□□ -1.3
YBX3-210ENST00000540975 PIP5K1BO14986 540 aa6.95□□□□□ -1.3
YBX3-210ENST00000540975 HOXD9P28356 352 aaPredicted RBP6.95□□□□□ -1.3
YBX3-210ENST00000540975 CFHR1Q03591 330 aa6.95□□□□□ -1.3
YBX3-210ENST00000540975 CSHL1Q14406 222 aa6.95□□□□□ -1.3
YBX3-210ENST00000540975 EARS2Q5JPH6 523 aaKnown RBP6.95□□□□□ -1.3
YBX3-210ENST00000540975 TFAP2DQ7Z6R9 452 aa6.95□□□□□ -1.3
YBX3-210ENST00000540975 IPO4Q8TEX9 1081 aaKnown RBP6.95□□□□□ -1.3
YBX3-210ENST00000540975 GLMPQ8WWB7 406 aa6.95□□□□□ -1.3
YBX3-210ENST00000540975 MUL1Q969V5 352 aa6.95□□□□□ -1.3
YBX3-210ENST00000540975 COQ8BQ96D53 544 aa6.95□□□□□ -1.3
YBX3-210ENST00000540975 TMEM41AQ96HV5 264 aa6.95□□□□□ -1.3
YBX3-210ENST00000540975 TTLL2Q9BWV7 592 aa6.95□□□□□ -1.3
YBX3-210ENST00000540975 GATA5Q9BWX5 397 aaPredicted RBP6.95□□□□□ -1.3
YBX3-210ENST00000540975 RNF26Q9BY78 433 aaPredicted RBP6.95□□□□□ -1.3
YBX3-210ENST00000540975 MLXIPLQ9NP71 852 aa6.95□□□□□ -1.3
YBX3-210ENST00000540975 CDC23Q9UJX2 597 aa6.95□□□□□ -1.3
YBX3-210ENST00000540975 SIRT4Q9Y6E7 314 aaPredicted RBP6.95□□□□□ -1.3
YBX3-210ENST00000540975 PPEF2O14830 753 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 ANXA6P08133 673 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 SERPINB3P29508 390 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 IDUAP35475 653 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 TECP42680 631 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 VPS41P49754 854 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 AGTR2P50052 363 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 HSF1Q00613 529 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 GRM4Q14833 912 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 XRRA1Q6P2D8 792 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 SCARB1Q8WTV0 552 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 CUL5Q93034 780 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 PAAF1Q9BRP4 392 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 TMEM79Q9BSE2 394 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 CDCP1Q9H5V8 836 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 ARFGAP3Q9NP61 516 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 ASNSD1Q9NWL6 643 aa6.94□□□□□ -1.3
YBX3-210ENST00000540975 PCDH17O14917 1159 aa6.93□□□□□ -1.3
YBX3-210ENST00000540975 INPPL1O15357 1258 aa6.93□□□□□ -1.3
YBX3-210ENST00000540975 SLC3A2P08195 630 aaKnown RBP6.93□□□□□ -1.3
YBX3-210ENST00000540975 ITGA5P08648 1049 aa6.93□□□□□ -1.3
YBX3-210ENST00000540975 ZNF84P51523 738 aa6.93□□□□□ -1.3
YBX3-210ENST00000540975 ZNF91Q05481 1191 aa6.93□□□□□ -1.3
YBX3-210ENST00000540975 STIM1Q13586 685 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms