RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 SPG21Q9NZD8 308 aa25.47■■□□□ 1.67
TTC3-225ENST00000540756 GJB5O95377 273 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 SEC24AO95486 1093 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 LINC00271P0C7V0 271 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 ADCY8P40145 1251 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 CXCR3P49682 368 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 DSG1Q02413 1049 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 GBE1Q04446 702 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 SLC10A2Q12908 348 aaPredicted RBP25.46■■□□□ 1.67
TTC3-225ENST00000540756 PPIGQ13427 754 aaKnown RBP eCLIP25.46■■□□□ 1.677e-7■□□□□ 10
TTC3-225ENST00000540756 EIF4EBP2Q13542 120 aaPredicted RBP25.46■■□□□ 1.67
TTC3-225ENST00000540756 NOMO1Q15155 1222 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 TKTL2Q9H0I9 626 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 WDCPQ9H6R7 721 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 RRN3Q9NYV6 651 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 IL37Q9NZH6 218 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 IFNB1P01574 187 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 RBP3P10745 1247 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 TMEM240Q5SV17 173 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 SYDE1Q6ZW31 735 aaPredicted RBP25.46■■□□□ 1.67
TTC3-225ENST00000540756 VSIG1Q86XK7 387 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 RNF139Q8WU17 664 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 SLC9A7Q96T83 725 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 FMO2Q99518 471 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 FBXO44Q9H4M3 255 aa25.46■■□□□ 1.67
TTC3-225ENST00000540756 CAPN2P17655 700 aa25.45■■□□□ 1.66
TTC3-225ENST00000540756 GLUD2P49448 558 aa25.45■■□□□ 1.66
TTC3-225ENST00000540756 TAF10Q12962 218 aa25.45■■□□□ 1.66
TTC3-225ENST00000540756 EFHC2Q5JST6 749 aa25.45■■□□□ 1.66
TTC3-225ENST00000540756 RASIP1Q5U651 963 aa25.45■■□□□ 1.66
TTC3-225ENST00000540756 MON1AQ86VX9 555 aa25.45■■□□□ 1.66
TTC3-225ENST00000540756 VPS52Q8N1B4 723 aa25.45■■□□□ 1.66
TTC3-225ENST00000540756 ART4Q93070 314 aa25.45■■□□□ 1.66
TTC3-225ENST00000540756 YWHAQP27348 245 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 SMARCB1Q12824 385 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 NNTQ13423 1086 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 BEND5Q7L4P6 421 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 PSTKQ8IV42 348 aaKnown RBP25.44■■□□□ 1.66
TTC3-225ENST00000540756 FBXO32Q969P5 355 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 NTAN1Q96AB6 310 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 OXCT2Q9BYC2 517 aaPredicted RBP25.44■■□□□ 1.66
TTC3-225ENST00000540756 ARHGEF4Q9NR80 690 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 MCF2LO15068 1137 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 TBX18O95935 607 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 F9P00740 461 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 ATF2P15336 505 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 ARL4AP40617 200 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 ITGA8P53708 1063 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 LMNB2Q03252 620 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 NCBP2-AS2Q69YL0 99 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 DDX53Q86TM3 631 aaKnown RBP25.44■■□□□ 1.66
TTC3-225ENST00000540756 FAM71DQ8N9W8 422 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.44■■□□□ 1.66
TTC3-225ENST00000540756 RNF34Q969K3 372 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 SNF8Q96H20 258 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 HERC2P3Q9BVR0 1158 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 PRDM10Q9NQV6 1147 aa25.44■■□□□ 1.66
TTC3-225ENST00000540756 FAM92AA1XBS5 289 aa25.43■■□□□ 1.66
TTC3-225ENST00000540756 ZNF487B1APH4 448 aa25.43■■□□□ 1.66
TTC3-225ENST00000540756 IRAK2O43187 625 aa25.43■■□□□ 1.66
TTC3-225ENST00000540756 HTRA4P83105 476 aaPredicted RBP25.43■■□□□ 1.66
TTC3-225ENST00000540756 SCAPQ12770 1279 aa25.43■■□□□ 1.66
TTC3-225ENST00000540756 P3H1Q32P28 736 aa25.43■■□□□ 1.66
TTC3-225ENST00000540756 C2orf15Q8WU43 125 aaKnown RBP25.43■■□□□ 1.66
TTC3-225ENST00000540756 SPATA17Q96L03 361 aa25.43■■□□□ 1.66
TTC3-225ENST00000540756 PWWP2AQ96N64 755 aa25.43■■□□□ 1.66
TTC3-225ENST00000540756 SMOC2Q9H3U7 446 aa25.43■■□□□ 1.66
TTC3-225ENST00000540756 MAGED2Q9UNF1 606 aaPredicted RBP25.43■■□□□ 1.66
TTC3-225ENST00000540756 TGM2P21980 687 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 TMC3Q7Z5M5 1100 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 TAB3Q8N5C8 712 aaPredicted RBP25.42■■□□□ 1.66
TTC3-225ENST00000540756 CCDC89Q8N998 374 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 ZBED2Q9BTP6 218 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 FRMD8P1Q9BZ68 369 aaPredicted RBP25.42■■□□□ 1.66
TTC3-225ENST00000540756 ADAM7Q9H2U9 754 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 WHRNQ9P202 907 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 LCHNA4D1U4 455 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 SLC38A8A6NNN8 435 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 H7C0C1 242 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 ATP5OP48047 213 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 DHX9Q08211 1270 aaKnown RBP25.42■■□□□ 1.66
TTC3-225ENST00000540756 GPS1Q13098 491 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 SEMA3BQ13214 749 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 UAP1Q16222 522 aaPredicted RBP25.42■■□□□ 1.66
TTC3-225ENST00000540756 DARS2Q6PI48 645 aaKnown RBP25.42■■□□□ 1.66
TTC3-225ENST00000540756 ZNF461Q8TAF7 563 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 TRIM62Q9BVG3 475 aa25.42■■□□□ 1.66
TTC3-225ENST00000540756 ZMYND8Q9ULU4 1186 aaPredicted RBP25.42■■□□□ 1.66
TTC3-225ENST00000540756 EEF2KO00418 725 aaKnown RBP25.41■■□□□ 1.66
TTC3-225ENST00000540756 ABLIM3O94929 683 aa25.41■■□□□ 1.66
TTC3-225ENST00000540756 HSPA9P38646 679 aaKnown RBP25.41■■□□□ 1.66
TTC3-225ENST00000540756 FAM193AP78312 1265 aa25.41■■□□□ 1.66
TTC3-225ENST00000540756 CALCOCO2Q13137 446 aa25.41■■□□□ 1.66
TTC3-225ENST00000540756 UBAP2Q5T6F2 1119 aaKnown RBP25.41■■□□□ 1.66
TTC3-225ENST00000540756 RFX8Q6ZV50 586 aa25.41■■□□□ 1.66
TTC3-225ENST00000540756 TP53INP2Q8IXH6 220 aa25.41■■□□□ 1.66
TTC3-225ENST00000540756 RSAD2Q8WXG1 361 aa25.41■■□□□ 1.66
TTC3-225ENST00000540756 XPO7Q9UIA9 1087 aaKnown RBP25.41■■□□□ 1.66
TTC3-225ENST00000540756 NR2E3Q9Y5X4 410 aa25.41■■□□□ 1.66
TTC3-225ENST00000540756 CHD9Q3L8U1 2897 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms