RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 ADGRG2Q8IZP9 1017 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 ZNF248Q8NDW4 579 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 DHTKD1Q96HY7 919 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 SENP8Q96LD8 212 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 MED15Q96RN5 788 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 LGMNQ99538 433 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 MTMR12Q9C0I1 747 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 CLSTN2Q9H4D0 955 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 CYP8B1Q9UNU6 501 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 BTBD3Q9Y2F9 522 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 HELZP42694 1942 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 COL5A1P20908 1838 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 CABIN1Q9Y6J0 2220 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 KPNA7A9QM74 516 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 CYB561D2O14569 222 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 TERTO14746 1132 aaKnown RBP9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 MAPK13O15264 365 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 BCAT2O15382 392 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 PCDHGA12O60330 932 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 DXOO77932 396 aaKnown RBP9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 CKMP06732 381 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 TMEM191BP0C7N4 346 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 HAPLN1P10915 354 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 TNNI1P19237 187 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 CCR10P46092 362 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 SLC6A11P48066 632 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 TAF6P49848 677 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 RBP5P82980 135 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 TARDBPQ13148 414 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 TBC1D25Q3MII6 688 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 ARHGAP40Q5TG30 622 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 DESI1Q6ICB0 168 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 ZC3H3Q8IXZ2 948 aaKnown RBP9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 CACTIN-AS1Q8N1I8 211 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 TTC16Q8NEE8 873 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 CADM4Q8NFZ8 388 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 SH3RF2Q8TEC5 729 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 ANKRD36BP1Q96IX9 119 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 CYP2S1Q96SQ9 504 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 CGRRF1Q99675 332 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 DUSP9Q99956 384 aaKnown RBP9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 ZCWPW1Q9H0M4 648 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 ARHGEF4Q9NR80 690 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 ITGA11Q9UKX5 1188 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 CEP192Q8TEP8 1941 aa9.38□□□□□ -0.91
TRAPPC1-202ENST00000540486 MEI4A8MW99 385 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 IKBKBO14920 756 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 BRINP1O60477 761 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 KRT38O76015 456 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 VNN1O95497 513 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 TNNC2P02585 160 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 CYP11A1P05108 521 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 KRT19P08727 400 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 ODC1P11926 461 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 HOXB2P14652 356 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 RPL13P26373 211 aaKnown RBP9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 NTSR1P30989 418 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 PSMC2P35998 433 aaKnown RBP9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 PDE6CP51160 858 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 VAMP7P51809 220 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 FKBP3Q00688 224 aaKnown RBP9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 BNC1Q01954 994 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 PPP3CAQ08209 521 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 UBAP2LQ14157 1087 aaKnown RBP9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 DHCR24Q15392 516 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 QPCTQ16769 361 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 INAVAQ3KP66 663 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 C4orf17Q53FE4 359 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 TDRD10Q5VZ19 366 aaKnown RBP9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 WSCD1Q658N2 575 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 TTI2Q6NXR4 508 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 LIMS2Q7Z4I7 341 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 ERICH1Q86X53 443 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 SFTPA1Q8IWL2 248 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 ZCCHC9Q8N567 271 aaKnown RBP9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 LRRC52Q8N7C0 313 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 ZNF513Q8N8E2 541 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 ELMO3Q96BJ8 720 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 TRMT2BQ96GJ1 504 aaKnown RBP9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 MYRFLQ96LU7 910 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 SLC22A12Q96S37 553 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 GTPBP4Q9BZE4 634 aaKnown RBP9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 TRPC7Q9HCX4 862 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 GDAP2Q9NXN4 497 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 KCNK4Q9NYG8 393 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 GMIPQ9P107 970 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 FTSJ1Q9UET6 329 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 ARHGAP26Q9UNA1 814 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 MAGED2Q9UNF1 606 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 FRMD4BQ9Y2L6 1034 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 ABCA12Q86UK0 2595 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 DOPEY1Q5JWR5 2465 aa9.37□□□□□ -0.91
TRAPPC1-202ENST00000540486 A0A1W2PQF6 199 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 TBC1D3BA6NDS4 549 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 SLC9A3R1O14745 358 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 CETN3O15182 167 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 AFPP02771 609 aaKnown RBP9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 CYP17A1P05093 508 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms