RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 TRMT5Q32P41 509 aaKnown RBP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 KHDC1Q4VXA5 237 aaKnown RBP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 TAF1BQ53T94 588 aaPredicted RBP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 PRR16Q569H4 304 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 PLEKHG4Q58EX7 1191 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 SH2D4BQ5SQS7 431 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 TRIM68Q6AZZ1 485 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 AADACL2Q6P093 401 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 TRIM72Q6ZMU5 477 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 LRRC74BQ6ZQY2 392 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 FAM43BQ6ZT52 329 aaPredicted RBP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 CENPUQ71F23 418 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 OTUD6AQ7L8S5 288 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 OTOAQ7RTW8 1153 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 NET1Q7Z628 596 aaPredicted RBP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 USP37Q86T82 979 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 PALB2Q86YC2 1186 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 TMPRSS6Q8IU80 811 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 RHOT1Q8IXI2 618 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 RCOR2Q8IZ40 523 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 XXYLT1Q8NBI6 393 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 TTC16Q8NEE8 873 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 FAM81AQ8TBF8 368 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 GPR152Q8TDT2 470 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 RHBDD1Q8TEB9 315 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 SLC20A1Q8WUM9 679 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 EZH1Q92800 747 aaPredicted RBP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 HPS1Q92902 700 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 SLC5A5Q92911 643 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 GJA10Q969M2 543 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 PPP2R3CQ969Q6 453 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 RBM15Q96T37 977 aaKnown RBP eCLIP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 RMDN3Q96TC7 470 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 ZNF184Q99676 751 aaPredicted RBP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 TRIM55Q9BYV6 548 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 OSBPL8Q9BZF1 889 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 OSBPL2Q9H1P3 480 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 C1orf21Q9H246 121 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 C12orf49Q9H741 205 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 SEPT11Q9NVA2 429 aaKnown RBP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 PSMC3IPQ9P2W1 217 aaPredicted RBP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 CIDEBQ9UHD4 219 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 GGT7Q9UJ14 662 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 SHOC2Q9UQ13 582 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 EFR3BQ9Y2G0 817 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 RWDD3Q9Y3V2 267 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 FRMPD2Q68DX3 1309 aaPredicted RBP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 ZNF318Q5VUA4 2279 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 SMIM31A0A1B0GVY4 71 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 RSPH10B2B2RC85 870 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 C5orf67F2Z3F1 127 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 GIPC1O14908 333 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 GYG2O15488 501 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 AP1G1O43747 822 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 CREB3O43889 395 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 ATP9AO75110 1047 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 CPNE3O75131 537 aaKnown RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 STK10O94804 968 aaKnown RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 HAUS5O94927 633 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 LYPLA2O95372 231 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 RPLP1P05386 114 aaKnown RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 RB1P06400 928 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 RSPH10BP0C881 870 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 DHRS4L1P0CG22 281 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 CYP11B1P15538 503 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 KRT15P19012 456 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 CRABP2P29373 138 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 NMT1P30419 496 aaKnown RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 HSD17B4P51659 736 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 IRX4P78413 519 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 GTF2BQ00403 316 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 CDK16Q00536 496 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 GCNT1Q02742 428 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 ZP2Q05996 745 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 DNAJC3Q13217 504 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 LSAMPQ13449 338 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 LAMB3Q13751 1172 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 MBTPS1Q14703 1052 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 DBN1Q16643 649 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 KLHL38Q2WGJ6 581 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 DNAL1Q4LDG9 190 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 LRRC23Q53EV4 343 aaPredicted RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 C4orf17Q53FE4 359 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 CELF3Q5SZQ8 465 aaKnown RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 UBAP2Q5T6F2 1119 aaKnown RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 ZNF618Q5T7W0 954 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 C6orf163Q5TEZ5 329 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 LIN9Q5TKA1 542 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 IZUMO3Q5VZ72 239 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 USP17L6PQ6QN14 398 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 B3GNT9Q6UX72 402 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 KYAT3Q6YP21 454 aaKnown RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 SEPT14Q6ZU15 432 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 SPRED2Q7Z698 418 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 PHLDB2Q86SQ0 1253 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 TREML1Q86YW5 311 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 ADHFE1Q8IWW8 467 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 MCOLN2Q8IZK6 566 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 VPS52Q8N1B4 723 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms