RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 APOL6Q9BWW8 343 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 VAV3Q9UKW4 847 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 ABT1Q9ULW3 272 aaKnown RBP12.3□□□□□ -0.44
NEK6-212ENST00000539416 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
NEK6-212ENST00000539416 UBIAD1Q9Y5Z9 338 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 LOC100653049A0A140TA62 436 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 IQANK1A0A1B0GTG1 560 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 TMX2-CTNND1H3BSU7 103 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 XPO1O14980 1071 aaKnown RBP12.3□□□□□ -0.44
NEK6-212ENST00000539416 LSM1O15116 133 aaKnown RBP12.3□□□□□ -0.44
NEK6-212ENST00000539416 SPTLC1O15269 473 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 KRT34O76011 436 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 FBXO21O94952 628 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 UNGP13051 313 aaPredicted RBP12.3□□□□□ -0.44
NEK6-212ENST00000539416 NELFEP18615 380 aaKnown RBP12.3□□□□□ -0.44
NEK6-212ENST00000539416 NFKBIAP25963 317 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 PHKA2P46019 1235 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 TM4SF4P48230 202 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 MXI1P50539 228 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 COPAP53621 1224 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 CCNA1P78396 465 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 PGM5Q15124 567 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 FAM182AQ5T1J6 154 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 ZFYVE27Q5T4F4 411 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 CRLF3Q8IUI8 442 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 RNF169Q8NCN4 708 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 DNERQ8NFT8 737 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 EXD1Q8NHP7 514 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 CPT1BQ92523 772 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 ACSF2Q96CM8 615 aaPredicted RBP12.3□□□□□ -0.44
NEK6-212ENST00000539416 VPS50Q96JG6 964 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 RMDN3Q96TC7 470 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 PDCD2LQ9BRP1 358 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 SLC38A7Q9NVC3 462 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 PSMD13Q9UNM6 376 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 ADGRA2Q96PE1 1338 aa12.3□□□□□ -0.44
NEK6-212ENST00000539416 MATN2O00339 956 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 MSH4O15457 936 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 PSTPIP1O43586 416 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 CSDE1O75534 798 aaKnown RBP12.29□□□□□ -0.44
NEK6-212ENST00000539416 MFAP3P55082 362 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 CD300CQ08708 224 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 SREBF2Q12772 1141 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 ITGA7Q13683 1181 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 CEP55Q53EZ4 464 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 ARHGEF16Q5VV41 709 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 NANOGNBQ7Z5D8 188 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 IFNL1Q8IU54 200 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 SLC9A9Q8IVB4 645 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 HELQQ8TDG4 1101 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 NSUN6Q8TEA1 469 aaKnown RBP12.29□□□□□ -0.44
NEK6-212ENST00000539416 ERLEC1Q96DZ1 483 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 BIRC8Q96P09 236 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 RANBP9Q96S59 729 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 HEPHQ9BQS7 1158 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 SLC13A1Q9BZW2 595 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 TRIM17Q9Y577 477 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 FADS3Q9Y5Q0 445 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 LCTP09848 1927 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 GOLGA8IPA6NC78 632 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 GOLGA8JA6NMD2 632 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 P4HA2O15460 535 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 STAMBPO95630 424 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 SSTR3P32745 418 aaPredicted RBP12.29□□□□□ -0.44
NEK6-212ENST00000539416 SLC5A3P53794 718 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 GDF10P55107 478 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 MRPS5P82675 430 aaKnown RBP12.29□□□□□ -0.44
NEK6-212ENST00000539416 PDAP1Q13442 181 aaKnown RBP12.29□□□□□ -0.44
NEK6-212ENST00000539416 ATG16L1Q676U5 607 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 RSPH3Q86UC2 560 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 NUDCD3Q8IVD9 361 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 FBXW8Q8N3Y1 598 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 RAB3IL1Q8TBN0 382 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 TFB1MQ8WVM0 346 aaKnown RBP12.29□□□□□ -0.44
NEK6-212ENST00000539416 ZNF778Q96MU6 729 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 AGAP3Q96P47 875 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 MPHOSPH6Q99547 160 aaKnown RBP12.29□□□□□ -0.44
NEK6-212ENST00000539416 AVENQ9NQS1 362 aaPredicted RBP12.29□□□□□ -0.44
NEK6-212ENST00000539416 SIRPGQ9P1W8 387 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 SAE1Q9UBE0 346 aaPredicted RBP12.29□□□□□ -0.44
NEK6-212ENST00000539416 PLLPQ9Y342 182 aa12.29□□□□□ -0.44
NEK6-212ENST00000539416 FAM32AQ9Y421 112 aaKnown RBP12.29□□□□□ -0.44
NEK6-212ENST00000539416 TRIM49D1C9J1S8 452 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 LYPLA1O75608 230 aaPredicted RBP12.28□□□□□ -0.44
NEK6-212ENST00000539416 TMEM63AO94886 807 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 INHBAP08476 426 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 KRT5P13647 590 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 CCND2P30279 289 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 BCAP31P51572 246 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 UBXN2AP68543 259 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 CREB5Q02930 508 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 BCL2A1Q16548 175 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 VSIG10LQ86VR7 867 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 TICAM1Q8IUC6 712 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 LILRA2Q8N149 483 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 CCDC33Q8N5R6 958 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 TRIML2Q8N7C3 387 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 TSPAN14Q8NG11 270 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 IL31RAQ8NI17 732 aa12.28□□□□□ -0.44
NEK6-212ENST00000539416 SLC44A1Q8WWI5 657 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms