RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 HCN2Q9UL51 889 aa18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 RAB23Q9ULC3 237 aa18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CEP192Q8TEP8 1941 aa18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TBC1D3BA6NDS4 549 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 AXIN1O15169 862 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 KLF8O95600 359 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 APBB3O95704 486 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TPM3P06753 285 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 GNA15P30679 374 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TRIP4Q15650 581 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CRY1Q16526 586 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 MEA1Q16626 185 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 LAIR1Q6GTX8 287 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 DPY19L2P1Q6NXN4 242 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 DENND1BQ6P3S1 775 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 RNF139Q8WU17 664 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 GAB3Q8WWW8 586 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 PLD4Q96BZ4 506 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 PCMTD1Q96MG8 357 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 NAP1L5Q96NT1 182 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CYTH4Q9UIA0 394 aa18.66■□□□□ 0.58
TNFRSF1A-209ENST00000536717 SGK1O00141 431 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 THAP12O43422 761 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 ADAM23O75077 832 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 LTFP02788 710 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TGM1P22735 817 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CHKAP35790 457 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 KCNMA1Q12791 1236 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 HSF5Q4G112 596 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 PREPLQ4J6C6 727 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 FYB2Q5VWT5 728 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 GRAMD4Q6IC98 578 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 MSANTD2Q6P1R3 559 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TOGARAM2Q6ZUX3 1019 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 FAM217AQ8IXS0 508 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CPXM2Q8N436 756 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TSTD1Q8NFU3 115 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 ERGIC2Q96RQ1 377 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 MIS12Q9H081 205 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 IFNKQ9P0W0 207 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 FBXO10Q9UK96 956 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 GMEB2Q9UKD1 530 aa18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 HBS1LQ9Y450 684 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TEX33O43247 280 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 MSI1O43347 362 aaKnown RBP18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CBFA2T2O43439 604 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 MED7O43513 233 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 RPP40O75818 363 aaKnown RBP18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 FBXO21O94952 628 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 PENKP01210 267 aaPredicted RBP18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CISD3P0C7P0 127 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 USP8P40818 1118 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 NR1I3Q14994 352 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 SYCP1Q15431 976 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 C10orf76Q5T2E6 689 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CEP68Q76N32 757 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 RASSF3Q86WH2 238 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 FAM160A2Q8N612 972 aaPredicted RBP18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 STK32AQ8WU08 396 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 LSM14BQ9BX40 385 aaKnown RBP18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 SLC4A5Q9BY07 1137 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 ST7Q9NRC1 585 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 DNAJC12Q9UKB3 198 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 STARD13Q9Y3M8 1113 aa18.64■□□□□ 0.58
TNFRSF1A-209ENST00000536717 LAMA1P25391 3075 aa18.64■□□□□ 0.57
TNFRSF1A-209ENST00000536717 PRRT4C9JH25 899 aa18.64■□□□□ 0.57
TNFRSF1A-209ENST00000536717 FYNP06241 537 aa18.64■□□□□ 0.57
TNFRSF1A-209ENST00000536717 PI4KAP42356 2102 aa18.64■□□□□ 0.57
TNFRSF1A-209ENST00000536717 DGKGP49619 791 aa18.64■□□□□ 0.57
TNFRSF1A-209ENST00000536717 SCUBE3Q8IX30 993 aa18.64■□□□□ 0.57
TNFRSF1A-209ENST00000536717 ZNF513Q8N8E2 541 aaPredicted RBP18.64■□□□□ 0.57
TNFRSF1A-209ENST00000536717 MDGA1Q8NFP4 955 aa18.64■□□□□ 0.57
TNFRSF1A-209ENST00000536717 KCNV2Q8TDN2 545 aa18.64■□□□□ 0.57
TNFRSF1A-209ENST00000536717 PARD6AQ9NPB6 346 aa18.64■□□□□ 0.57
TNFRSF1A-209ENST00000536717 PLCB1Q9NQ66 1216 aa18.64■□□□□ 0.57
TNFRSF1A-209ENST00000536717 CKAP5Q14008 2032 aa18.64■□□□□ 0.57
TNFRSF1A-209ENST00000536717 RETP07949 1114 aa18.63■□□□□ 0.57
TNFRSF1A-209ENST00000536717 DGKEP52429 567 aa18.63■□□□□ 0.57
TNFRSF1A-209ENST00000536717 EOGTQ5NDL2 527 aa18.63■□□□□ 0.57
TNFRSF1A-209ENST00000536717 ANO7Q6IWH7 933 aa18.63■□□□□ 0.57
TNFRSF1A-209ENST00000536717 NUDT18Q6ZVK8 323 aa18.63■□□□□ 0.57
TNFRSF1A-209ENST00000536717 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1A-209ENST00000536717 KBTBD6Q86V97 674 aa18.63■□□□□ 0.57
TNFRSF1A-209ENST00000536717 XPO4Q9C0E2 1151 aaKnown RBP18.63■□□□□ 0.57
TNFRSF1A-209ENST00000536717 SIK3Q9Y2K2 1263 aa18.63■□□□□ 0.57
TNFRSF1A-209ENST00000536717 A0A1W2PQC6 194 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 E5RJQ4 531 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 FOXN3O00409 490 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 PAPSS1O43252 624 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 IGLV3-27P01718 113 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 PNMA6AP0CW24 399 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 CLCN1P35523 988 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 ACADSBP45954 432 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 HARS2P49590 506 aaKnown RBP18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 KLHDC7AQ5VTJ3 777 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 EGFLAMQ63HQ2 1017 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 SMYD5Q6GMV2 418 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 SARM1Q6SZW1 724 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 TMEM110Q86TL2 294 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 WDTC1Q8N5D0 677 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms