RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	RSRC2	Q7L4I2	434 aa	Known RBP	6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	SPRED1	Q7Z699	444 aa		6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	PEG10	Q86TG7	708 aa	Known RBP	6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	OR4N4	Q8N0Y3	316 aa		6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	PNPLA1	Q8N8W4	532 aa		6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	FAM71D	Q8N9W8	422 aa		6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	NPIPB3	Q92617	1050 aa		6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	ZNF503	Q96F45	646 aa		6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	PRR11	Q96HE9	360 aa	Predicted RBP	6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	TWNK	Q96RR1	684 aa		6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	CINP	Q9BW66	212 aa	Predicted RBP	6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	ZNF341	Q9BYN7	854 aa		6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	ST3GAL5	Q9UNP4	418 aa		6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	SLC12A4	Q9UP95	1085 aa		6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	PCDHA10	Q9Y5I2	948 aa		6.08	□□□□□ -1.44
PRKDC-208	ENST00000536710	AGAP5	A6NIR3	686 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710		A6NLC8	198 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	SEPT4	O43236	478 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	ORC4	O43929	436 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	PDE8B	O95263	885 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	TMIGD3	P0DMS9	266 aa	Predicted RBP	6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	CPA1	P15085	419 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	CXCR5	P32302	372 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	AVPR1B	P47901	424 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	CDK7	P50613	346 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	GEMIN4	P57678	1058 aa	Known RBP	6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	EEFSEC	P57772	596 aa	Known RBP	6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	FAM3B	P58499	235 aa	Predicted RBP	6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	RBM6	P78332	1123 aa	Known RBP	6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	EFEMP1	Q12805	493 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	MAPK7	Q13164	816 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	CTXN3	Q4LDR2	81 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	LRRC24	Q50LG9	513 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	RETSAT	Q6NUM9	610 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	C16orf89	Q6UX73	402 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	USP51	Q70EK9	711 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	WDR53	Q7Z5U6	358 aa	Predicted RBP	6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	ANKS1B	Q7Z6G8	1248 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	FSIP1	Q8NA03	581 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	ACTRT2	Q8TDY3	377 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	HTRA1	Q92743	480 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	SKA1	Q96BD8	255 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	HVCN1	Q96D96	273 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	RBM17	Q96I25	401 aa	Known RBP	6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	MMRN2	Q9H8L6	949 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	RMI1	Q9H9A7	625 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	UBN1	Q9NPG3	1134 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	DUSP22	Q9NRW4	184 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	RASSF1	Q9NS23	344 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	SMC4	Q9NTJ3	1288 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	TMLHE	Q9NVH6	421 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	DLL3	Q9NYJ7	618 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	DNAJC16	Q9Y2G8	782 aa		6.07	□□□□□ -1.44
PRKDC-208	ENST00000536710	MAST3	O60307	1309 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	FAM90A20P	A6NIJ5	464 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	LINC00473	A8K010	186 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	NKX2-8	O15522	239 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	SUV39H1	O43463	412 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	MBD4	O95243	580 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	CYP21A2	P08686	494 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	FPR3	P25089	353 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	KRT9	P35527	623 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	GRIA3	P42263	894 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	DIO1	P49895	249 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	TUB	P50607	506 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	RPL15	P61313	204 aa	Known RBP	6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	PSG6	Q00889	435 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	CHRND	Q07001	517 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	MPP3	Q13368	585 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	DNASE1L3	Q13609	305 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	MAPRE1	Q15691	268 aa	Known RBP	6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	PCID2	Q5JVF3	399 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	MIIP	Q5JXC2	388 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	MAP3K21	Q5TCX8	1036 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	FNDC7	Q5VTL7	733 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	KIAA0895L	Q68EN5	471 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	ACSM6	Q6P461	480 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	STAM	Q92783	540 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	LENG8	Q96PV6	779 aa	Predicted RBP	6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	PIGS	Q96S52	555 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	ABHD16B	Q9H3Z7	469 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	PLEKHA2	Q9HB19	425 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	SERTAD4	Q9NUC0	356 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	ADAMTS5	Q9UNA0	930 aa		6.06	□□□□□ -1.44
PRKDC-208	ENST00000536710	CCDC151	A5D8V7	595 aa		6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710		H0YIZ8	118 aa		6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	RHOBTB3	O94955	611 aa		6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	HEXIM1	O94992	359 aa	Known RBP	6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	FAM163B	P0C2L3	166 aa		6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	MAK	P20794	623 aa		6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	PCSK6	P29122	969 aa		6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	ELF1	P32519	619 aa		6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	GALNS	P34059	522 aa		6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	LIFR	P42702	1097 aa		6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	PCP4	P48539	62 aa		6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	CCR5	P51681	352 aa		6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	COPB1	P53618	953 aa	Known RBP	6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	RCAN1	P53805	252 aa		6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	RAE1	P78406	368 aa	Known RBP	6.05	□□□□□ -1.44
PRKDC-208	ENST00000536710	LMAN2	Q12907	356 aa		6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms