RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 IZUMO3Q5VZ72 239 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 RFX8Q6ZV50 586 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 TMC7Q7Z402 723 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 TMEM173Q86WV6 379 aaPredicted RBP8.52□□□□□ -1.05
ABCA4-207ENST00000536513 MAP7D3Q8IWC1 876 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 C3orf20Q8ND61 904 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 B4GALNT2Q8NHY0 566 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 CCDC110Q8TBZ0 833 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 CFAP36Q96G28 342 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 ATXN3LQ9H3M9 355 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 CYP3A43Q9HB55 503 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 TMEM191CA6NGB0 347 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 RASGRF2O14827 1237 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 CYP1A1P04798 512 aaPredicted RBP8.52□□□□□ -1.05
ABCA4-207ENST00000536513 GOT1P17174 413 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 KRT15P19012 456 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 AXLP30530 894 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 ETFBP38117 255 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 PNPLA4P41247 253 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 RPL21P46778 160 aaKnown RBP8.52□□□□□ -1.05
ABCA4-207ENST00000536513 ITGA8P53708 1063 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 SESN2P58004 480 aaPredicted RBP8.52□□□□□ -1.05
ABCA4-207ENST00000536513 YWHAZP63104 245 aaKnown RBP8.52□□□□□ -1.05
ABCA4-207ENST00000536513 CRADDP78560 199 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 COG7P83436 770 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 TMED1Q13445 227 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 TUSC3Q13454 348 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 SPARCL1Q14515 664 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 KYAT1Q16773 422 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 LONRF1Q17RB8 773 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 SPOCD1Q6ZMY3 1216 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 LRRC34Q8IZ02 419 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 ZBED8Q8IZ13 594 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 GPR62Q9BZJ7 368 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 VRTNQ9H8Y1 702 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 PLEKHA5Q9HAU0 1116 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 CRTAC1Q9NQ79 661 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 RAB6BQ9NRW1 208 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 TMLHEQ9NVH6 421 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 ZFATQ9P243 1243 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 RNF14Q9UBS8 474 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 NME7Q9Y5B8 376 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 PCDHA3Q9Y5H8 950 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 SCN4AP35499 1836 aa8.52□□□□□ -1.05
ABCA4-207ENST00000536513 NBNO60934 754 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 SKIP12755 728 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 GJA1P17302 382 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 NPR3P17342 541 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 WEE1P30291 646 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 ELF3P78545 371 aaPredicted RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 SKOR1P84550 965 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 PIGHQ14442 188 aaPredicted RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 PDCD2Q16342 344 aaPredicted RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 C4orf46Q504U0 113 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 RTN4RL1Q86UN2 441 aaPredicted RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 FAM35AQ86V20 835 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 CD302Q8IX05 232 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 ZDHHC14Q8IZN3 488 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 CCDC185Q8N715 623 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 AGAP11Q8TF27 550 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 PDCD6IPQ8WUM4 868 aaKnown RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 VCX3BQ9H321 246 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 SEMA4AQ9H3S1 761 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 VCX3AQ9NNX9 186 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 AP4E1Q9UPM8 1137 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 VCANP13611 3396 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 TCP11X1B4DZS4 312 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 SMAPO00193 183 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 PECAM1P16284 738 aaPredicted RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 SLC6A3Q01959 620 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 PDE1CQ14123 709 aaPredicted RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 MAP7Q14244 749 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 FAM187BQ17R55 369 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 LHX8Q68G74 356 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 LRRTM3Q86VH5 581 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 RNF135Q8IUD6 432 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 DTX3LQ8TDB6 740 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 PXYLP1Q8TE99 480 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 KBTBD7Q8WVZ9 684 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 FAF2Q96CS3 445 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 LGMNQ99538 433 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 SNRNP25Q9BV90 132 aaKnown RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 FGFR1OP2Q9NVK5 253 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 RHBDL2Q9NX52 303 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 WDR87Q6ZQQ6 2873 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 WDR91A4D1P6 747 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 EME2A4GXA9 379 aaPredicted RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 DNM1LO00429 736 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 TSPAN3O60637 253 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 AVILO75366 819 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 CAPN15O75808 1086 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 UBOX5O94941 541 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 KRT7P08729 469 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 KLC1Q07866 573 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 CUL1Q13616 776 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 RCN2Q14257 317 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 UBAP2Q5T6F2 1119 aaKnown RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 BZW1Q7L1Q6 419 aaKnown RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 TP53INP2Q8IXH6 220 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms