RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 RASSF3Q86WH2 238 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 PASD1Q8IV76 773 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 SCUBE3Q8IX30 993 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 FAM71AQ8IYT1 594 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 CPXM2Q8N436 756 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 DQX1Q8TE96 717 aaKnown RBP17.11■□□□□ 0.33
ATL3-202ENST00000535789 RUBCNQ92622 972 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 CPXM1Q96SM3 734 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 ACOX2Q99424 681 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 BPIFA3Q9BQP9 254 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 GANQ9H2C0 597 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 CD248Q9HCU0 757 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 ST7Q9NRC1 585 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 OLA1Q9NTK5 396 aaKnown RBP17.11■□□□□ 0.33
ATL3-202ENST00000535789 FANCLQ9NW38 375 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 DEC1Q9P2X7 70 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 STRIP2Q9ULQ0 834 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 PCDHGC3Q9UN70 934 aa17.11■□□□□ 0.33
ATL3-202ENST00000535789 CCDC163A0A0D9SF12 145 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 EPHB6O15197 1021 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 TNFRSF4P43489 277 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 MRPS21P82921 87 aaKnown RBP17.1■□□□□ 0.33
ATL3-202ENST00000535789 IQCB1Q15051 598 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 TAF5Q15542 800 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 CRY1Q16526 586 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 KLHDC7AQ5VTJ3 777 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 SYPL2Q5VXT5 272 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 GRAMD4Q6IC98 578 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 PRR23BQ6ZRT6 265 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 APTXQ7Z2E3 356 aaKnown RBP17.1■□□□□ 0.33
ATL3-202ENST00000535789 TMEM110Q86TL2 294 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 CAMKK1Q8N5S9 505 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 MDGA1Q8NFP4 955 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 STK32AQ8WU08 396 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 GAB3Q8WWW8 586 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 MYEOVQ96EZ4 313 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 FAM81BQ96LP2 452 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 LSM14BQ9BX40 385 aaKnown RBP17.1■□□□□ 0.33
ATL3-202ENST00000535789 CBX8Q9HC52 389 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 PLCB1Q9NQ66 1216 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 STOML2Q9UJZ1 356 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 NAALADL1Q9UQQ1 740 aa17.1■□□□□ 0.33
ATL3-202ENST00000535789 HBS1LQ9Y450 684 aaKnown RBP17.1■□□□□ 0.33
ATL3-202ENST00000535789 ADAMTS9Q9P2N4 1935 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 PI4KAP42356 2102 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 MED7O43513 233 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 FBXO21O94952 628 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 APBB3O95704 486 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 HOXD9P28356 352 aaPredicted RBP17.09■□□□□ 0.33
ATL3-202ENST00000535789 SLC6A4P31645 630 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 ZNF165P49910 485 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 SIM2Q14190 667 aaPredicted RBP17.09■□□□□ 0.33
ATL3-202ENST00000535789 DRAP1Q14919 205 aaPredicted RBP17.09■□□□□ 0.33
ATL3-202ENST00000535789 GEN1Q17RS7 908 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 NADSYN1Q6IA69 706 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 TAC4Q86UU9 113 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 KIAA2013Q8IYS2 634 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 FAM160A2Q8N612 972 aaPredicted RBP17.09■□□□□ 0.33
ATL3-202ENST00000535789 C1orf131Q8NDD1 294 aaKnown RBP17.09■□□□□ 0.33
ATL3-202ENST00000535789 ADAM32Q8TC27 787 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 RNF139Q8WU17 664 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 FCRL2Q96LA5 508 aaPredicted RBP17.09■□□□□ 0.33
ATL3-202ENST00000535789 TPSD1Q9BZJ3 242 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 DCLK3Q9C098 648 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 NAT10Q9H0A0 1025 aaKnown RBP17.09■□□□□ 0.33
ATL3-202ENST00000535789 RBSNQ9H1K0 784 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 VPS16Q9H269 839 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 WDR35Q9P2L0 1181 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 EBF1Q9UH73 591 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 ZNF510Q9Y2H8 683 aa17.09■□□□□ 0.33
ATL3-202ENST00000535789 TP53BP1Q12888 1972 aaPredicted RBP17.09■□□□□ 0.33
ATL3-202ENST00000535789 CACNA1AO00555 2505 aa17.08■□□□□ 0.33
ATL3-202ENST00000535789 FAM170AA1A519 330 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 TBC1D3BA6NDS4 549 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 DCLK1O15075 740 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 AXIN1O15169 862 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 IGLV3-25P01717 112 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 ERBB2P04626 1255 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 UCHL3P15374 230 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 ZNF18P17022 549 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 CNR2P34972 360 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 DGKGP49619 791 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 RAPGEF1Q13905 1077 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 PTPN20Q4JDL3 420 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 FAM133BQ5BKY9 247 aaKnown RBP17.08■□□□□ 0.32
ATL3-202ENST00000535789 LAIR1Q6GTX8 287 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 ANO7Q6IWH7 933 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 KBTBD6Q86V97 674 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 DHX40Q8IX18 779 aaKnown RBP17.08■□□□□ 0.32
ATL3-202ENST00000535789 ZNF513Q8N8E2 541 aaPredicted RBP17.08■□□□□ 0.32
ATL3-202ENST00000535789 TSTD1Q8NFU3 115 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 WFDC5Q8TCV5 224 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 DDX1Q92499 740 aaKnown RBP17.08■□□□□ 0.32
ATL3-202ENST00000535789 SLC39A13Q96H72 371 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 PRICKLE1Q96MT3 831 aaPredicted RBP17.08■□□□□ 0.32
ATL3-202ENST00000535789 XPO6Q96QU8 1125 aaKnown RBP17.08■□□□□ 0.32
ATL3-202ENST00000535789 NCDNQ9UBB6 729 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 SIK3Q9Y2K2 1263 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 STARD13Q9Y3M8 1113 aa17.08■□□□□ 0.32
ATL3-202ENST00000535789 GOLGA6L7A0A1B0GV03 622 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms