RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 DCHS1Q96JQ0 3298 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 MYO16Q9Y6X6 1858 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 IGHV1OR15-9A0A0B4J2B8 117 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 TMEM8BA6NDV4 472 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 HHLA1C9JL84 531 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 ARHGAP33O14559 1287 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 SART1O43290 800 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 FGFR1OPO95684 399 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 ATP5BP06576 529 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 EPHX1P07099 455 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 RAD23BP54727 409 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 MFAP3P55082 362 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 ADIGQ0VDE8 80 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 PNOCQ13519 176 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 FNDC3BQ53EP0 1204 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 C1orf220Q5T0J3 134 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 IL27RAQ6UWB1 636 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 Q6ZNB5 142 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 TOGARAM2Q6ZUX3 1019 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 SMYD4Q8IYR2 804 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 MINDY1Q8N5J2 469 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 SLC4A11Q8NBS3 891 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 ERLEC1Q96DZ1 483 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 TMA16Q96EY4 203 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 EEF2KMTQ96G04 330 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 MRGPRX1Q96LB2 322 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 NUP58Q9BVL2 599 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 ULBP1Q9BZM6 244 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 GDPD2Q9HCC8 539 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 CNGB3Q9NQW8 809 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 MBD1Q9UIS9 605 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 AGO1Q9UL18 857 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 PCDHB4Q9Y5E5 795 aa13.85□□□□□ -0.19
CLSTN3-205ENST00000535452 A0A1B0GTW7 788 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 A0A1W2PQF6 199 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 PRRT4C9JH25 899 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 CDX4O14627 284 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 TRIM24O15164 1050 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 LATS1O95835 1130 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 GNA14O95837 355 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 PENKP01210 267 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 PROS1P07225 676 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 LCP1P13796 627 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 PRCPP42785 496 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 ST8SIA6P61647 398 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 SIM1P81133 766 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 MESP2Q0VG99 397 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 LRMPQ12912 555 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 SLC14A1Q13336 389 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 TEAD4Q15561 434 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 TTC31Q49AM3 519 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 NUGGCQ68CJ6 796 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 TMEM270Q6UE05 265 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 UNQ6494/PRO21346Q6UXR6 183 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 SCD5Q86SK9 330 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 TMPRSS6Q8IU80 811 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 FMNL3Q8IVF7 1028 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 PPM1KQ8N3J5 372 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 SNX19Q92543 992 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 WBP2Q969T9 261 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 DHTKD1Q96HY7 919 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 ACOX2Q99424 681 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 ARID3AQ99856 593 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 ADAM33Q9BZ11 813 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 FBRSQ9HAH7 460 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 TMEM74BQ9NUR3 256 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 ELOVL2Q9NXB9 296 aa13.84□□□□□ -0.19
CLSTN3-205ENST00000535452 KIAA1549LQ6ZVL6 1849 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 M0QYV0 167 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 CAPN9O14815 690 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 RNASEH1O60930 286 aaKnown RBP13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 MOCS3O95396 460 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 CER1O95813 267 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 DNTTP04053 509 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 PAEPP09466 180 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 NCAM1P13591 858 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 PDE4CQ08493 712 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 SUZ12Q15022 739 aaKnown RBP13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 ZNF423Q2M1K9 1284 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 ZCWPW2Q504Y3 356 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 FYB2Q5VWT5 728 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 PEAR1Q5VY43 1037 aaPredicted RBP13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 METTL3Q86U44 580 aaKnown RBP13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 AHI1Q8N157 1196 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 FRMD1Q8N878 549 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 CADM4Q8NFZ8 388 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 SEMA4DQ92854 862 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 SKA1Q96BD8 255 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 TOE1Q96GM8 510 aaKnown RBP13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 CEP63Q96MT8 703 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 GPR174Q9BXC1 333 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 IRX2Q9BZI1 471 aaPredicted RBP13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 THAP10Q9P2Z0 257 aaPredicted RBP13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 NCKAP1Q9Y2A7 1128 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 CEP83Q9Y592 693 aa13.83□□□□□ -0.2
CLSTN3-205ENST00000535452 EML5Q05BV3 1969 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 ANTXRLA6NF34 631 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 UPK3BL1B0FP48 263 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 UPK3BL2E5RIL1 263 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 GIPC1O14908 333 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms