RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZNF263O14978 683 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 MAGEB2O15479 319 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 ARHGAP6O43182 974 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 EDIL3O43854 480 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 TADA2AO75478 443 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 SEC24AO95486 1093 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 SNRPB2P08579 225 aaKnown RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 HNRNPA1P09651 372 aaKnown RBP eCLIP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 PCP11498 1178 aaKnown RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 SDSP20132 328 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 MX1P20591 662 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 CSRP1P21291 193 aaKnown RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 BCKDHBP21953 392 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 ITPKBP27987 946 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 TMOD1P28289 359 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 OR1D2P34982 312 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 MLH1P40692 756 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 KPNA1P52294 538 aaPredicted RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 ARPP19P56211 112 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 DSC1Q08554 894 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 FHL2Q14192 279 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 NRN1LQ496H8 165 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 SV2CQ496J9 727 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 MTERF2Q49AM1 385 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 LIN9Q5TKA1 542 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 ANKRD45Q5TZF3 282 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 FAM171A1Q5VUB5 890 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 JAKMIP3Q5VZ66 844 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 E4F1Q66K89 784 aaPredicted RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 FUT10Q6P4F1 479 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 TEPPQ6URK8 271 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 CWC27Q6UX04 472 aaKnown RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 PLA2G4DQ86XP0 818 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 RHPN2Q8IUC4 686 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 TRIM59Q8IWR1 403 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 ZNF843Q8N446 348 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 DEFB119Q8N690 84 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 Q8TCH9 128 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 FRS2Q8WU20 508 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 DNASE1L2Q92874 299 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 RILPL2Q969X0 211 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 TMEM143Q96AN5 459 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 ELSPBP1Q96BH3 223 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 PGBD4Q96DM1 585 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 RRP36Q96EU6 259 aaKnown RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 CPB2Q96IY4 423 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 ZC3H10Q96K80 434 aaKnown RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 NLRP4Q96MN2 994 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 CEP89Q96ST8 783 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 COLEC11Q9BWP8 271 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 IFT122Q9HBG6 1241 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 LY9Q9HBG7 655 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 CAPN10Q9HC96 672 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 ZFP14Q9HCL3 533 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 TMEM9BQ9NQ34 198 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 NRBP2Q9NSY0 501 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 TMEM74BQ9NUR3 256 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 FNIP2Q9P278 1114 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 DPP7Q9UHL4 492 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 ING1Q9UK53 422 aaPredicted RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 DDX19BQ9UMR2 479 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 SSX2IPQ9Y2D8 614 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 IPPQ9Y573 584 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 X6R8D5 127 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 LAMA4Q16363 1823 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 UTP20O75691 2785 aaKnown RBP3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 COL1A2P08123 1366 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 DOCK5Q9H7D0 1870 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 SALL3Q9BXA9 1300 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 IGLV3-22A0A075B6J6 115 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 MYBPHLA2RUH7 354 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 HEPACAM2A8MVW5 462 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 NPIPB8E9PQR5 432 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 SPECC1L-ADORA2AF8WAN1 911 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 IPO5O00410 1097 aaKnown RBP3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 CHMP2AO43633 222 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 MAFKO60675 156 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 FBXO21O94952 628 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 PAPSS2O95340 614 aaPredicted RBP3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 MYL4P12829 197 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 PTPN2P17706 415 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 PSMC3P17980 439 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 ATP2B1P20020 1258 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 SFPQP23246 707 aaKnown RBP eCLIP3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 HOXA6P31267 233 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 HOXC12P31275 282 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 NASPP49321 788 aaPredicted RBP3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 DHPSP49366 369 aaPredicted RBP3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 SLC26A2P50443 739 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 ZNF143P52747 638 aaPredicted RBP3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 PDE1AP54750 535 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 NPEPPSP55786 919 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 ANTXR2P58335 489 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 PRKCEQ02156 737 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 ARID5AQ03989 594 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 SRSF1Q07955 248 aaKnown RBP eCLIP3.29□□□□□ -1.883e-6■□□□□ 8.3
CHMP4A-208ENST00000534106 CYP4F3Q08477 520 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 TRAF1Q13077 416 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 KCNAB2Q13303 367 aa3.29□□□□□ -1.88
CHMP4A-208ENST00000534106 LSAMPQ13449 338 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms