RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 DEUP1Q05D60 604 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 ACAP1Q15027 740 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 ARHGAP29Q52LW3 1261 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 ZC3H12AQ5D1E8 599 aaKnown RBP12.4□□□□□ -0.42
COMMD9-208ENST00000533643 DAB2IPQ5VWQ8 1189 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 PTCRAQ6ISU1 281 aaPredicted RBP12.4□□□□□ -0.42
COMMD9-208ENST00000533643 OTOP3Q7RTS5 596 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 C17orf53Q8N3J3 647 aaPredicted RBP12.4□□□□□ -0.42
COMMD9-208ENST00000533643 LRRC57Q8N9N7 239 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 RSPRY1Q96DX4 576 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 CALR3Q96L12 384 aaKnown RBP12.4□□□□□ -0.42
COMMD9-208ENST00000533643 FCRL2Q96LA5 508 aaPredicted RBP12.4□□□□□ -0.42
COMMD9-208ENST00000533643 TRPV4Q9HBA0 871 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 TDP1Q9NUW8 608 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 LCMT1Q9UIC8 334 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 ZFP37Q9Y6Q3 630 aaPredicted RBP12.4□□□□□ -0.42
COMMD9-208ENST00000533643 DENND4CQ5VZ89 1909 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 KCNU1A8MYU2 1149 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 LEFTY2O00292 366 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 GREM1O60565 184 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 LRCH4O75427 683 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 STC2O76061 302 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 RNF8O76064 485 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 IRF1P10914 325 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 TCF4P15884 667 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 FCARP24071 287 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 MIPP30301 263 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 RING1Q06587 406 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 PPP2R5DQ14738 602 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 IFI16Q16666 785 aaKnown RBP12.39□□□□□ -0.43
COMMD9-208ENST00000533643 PUS10Q3MIT2 529 aaKnown RBP12.39□□□□□ -0.43
COMMD9-208ENST00000533643 C11orf63Q6NUN7 778 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 CC2D1AQ6P1N0 951 aaPredicted RBP12.39□□□□□ -0.43
COMMD9-208ENST00000533643 SND1Q7KZF4 910 aaKnown RBP eCLIP12.39□□□□□ -0.43
COMMD9-208ENST00000533643 FAM131BQ86XD5 332 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 RIN3Q8TB24 985 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 SH3RF2Q8TEC5 729 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 PLD4Q96BZ4 506 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 LRRC3BQ96PB8 259 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 PHF7Q9BWX1 381 aaPredicted RBP12.39□□□□□ -0.43
COMMD9-208ENST00000533643 GOLPH3Q9H4A6 298 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 TMEM51Q9NW97 253 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 CFAP97Q9P2B7 532 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 EPS15L1Q9UBC2 864 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 USTQ9Y2C2 406 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 ZKSCAN5Q9Y2L8 839 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 HYOU1Q9Y4L1 999 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 ALG6Q9Y672 507 aa12.39□□□□□ -0.43
COMMD9-208ENST00000533643 C5orf42Q9H799 3197 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 DENND4AQ7Z401 1863 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 C2CD4DB7Z1M9 353 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 I6L893 689 aaPredicted RBP12.38□□□□□ -0.43
COMMD9-208ENST00000533643 PALMO75781 387 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 KLKB1P03952 638 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 SLC2A3P11169 496 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 TCF3P15923 654 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 DESP17661 470 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 COMTP21964 271 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 SP100P23497 879 aaPredicted RBP12.38□□□□□ -0.43
COMMD9-208ENST00000533643 CCR1P32246 355 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 PCK1P35558 622 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 VIPR2P41587 438 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 TAS2R40P59535 323 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 USP4Q13107 963 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 ZNF77Q15935 545 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 TANGO2Q6ICL3 276 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 SCYL2Q6P3W7 929 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 CYP4V2Q6ZWL3 525 aaPredicted RBP12.38□□□□□ -0.43
COMMD9-208ENST00000533643 SLFN11Q7Z7L1 901 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 DAAM2Q86T65 1068 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 DDX42Q86XP3 938 aaKnown RBP eCLIP12.38□□□□□ -0.43
COMMD9-208ENST00000533643 ST13P5Q8NFI4 369 aaPredicted RBP12.38□□□□□ -0.43
COMMD9-208ENST00000533643 RNF34Q969K3 372 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 ACSF2Q96CM8 615 aaPredicted RBP12.38□□□□□ -0.43
COMMD9-208ENST00000533643 PEBP4Q96S96 227 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 NCAPGQ9BPX3 1015 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 IRX2Q9BZI1 471 aaPredicted RBP12.38□□□□□ -0.43
COMMD9-208ENST00000533643 WDCPQ9H6R7 721 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 KIF9Q9HAQ2 790 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 ANLNQ9NQW6 1124 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.38□□□□□ -0.43
COMMD9-208ENST00000533643 ARHGEF38Q9NXL2 777 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 PCSK1NQ9UHG2 260 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 CAPN6Q9Y6Q1 641 aa12.38□□□□□ -0.43
COMMD9-208ENST00000533643 GOLGA6L9A6NEM1 432 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 HEPACAM2A8MVW5 462 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 PRPSAP2O60256 369 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 IL1R2P27930 398 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 CORO1AP31146 461 aaKnown RBP12.37□□□□□ -0.43
COMMD9-208ENST00000533643 ADRA1BP35368 520 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 SLC1A1P43005 524 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 HARS2P49590 506 aaKnown RBP12.37□□□□□ -0.43
COMMD9-208ENST00000533643 SLC25A11Q02978 314 aaKnown RBP12.37□□□□□ -0.43
COMMD9-208ENST00000533643 BRMS1LQ5PSV4 323 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 NUGGCQ68CJ6 796 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 PARM1Q6UWI2 310 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 Q6ZNB5 142 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 HTR3DQ70Z44 454 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 UNC45BQ8IWX7 931 aa12.37□□□□□ -0.43
COMMD9-208ENST00000533643 CELF5Q8N6W0 485 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 501.4 ms