RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 PLD4Q96BZ4 506 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 ACOX2Q99424 681 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 NUSAP1Q9BXS6 441 aaKnown RBP12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 CNGB3Q9NQW8 809 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 ABCC13Q9NSE7 274 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 MBD1Q9UIS9 605 aaPredicted RBP12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 PCDHB4Q9Y5E5 795 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 PPP1R3GB7ZBB8 358 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 O00370 1275 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 TIMM44O43615 452 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 HOXD12P35452 270 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 PTGER3P43115 390 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 ZNF445P59923 1031 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 IRX4P78413 519 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 RPL6Q02878 288 aaKnown RBP12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 ADIGQ0VDE8 80 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 STARD3Q14849 445 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 TRIP4Q15650 581 aaPredicted RBP12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 CNGA2Q16280 664 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 TRIM61Q5EBN2 209 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 TTI2Q6NXR4 508 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 ARMCX6Q7L4S7 300 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 FMNL3Q8IVF7 1028 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 SCML4Q8N228 414 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 PPM1KQ8N3J5 372 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 CEP76Q8TAP6 659 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 NDRG1Q92597 394 aaKnown RBP12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 SLC2A11Q9BYW1 496 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 TMEM9BQ9NQ34 198 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 CACNA2D2Q9NY47 1150 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 CALCOCO1Q9P1Z2 691 aa12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 EVLQ9UI08 416 aaPredicted RBP12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 HBS1LQ9Y450 684 aaKnown RBP12.98□□□□□ -0.33
CAPRIN1-213ENST00000533562 YJEFN3A6XGL0 299 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 PATE3B3GLJ2 98 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 E7ENQ6 273 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 KCNK5O95279 499 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 FGFR1OPO95684 399 aaKnown RBP12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 LCP1P13796 627 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 NDUFV2P19404 249 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 MFAP3P55082 362 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 MORC3Q14149 939 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 PKDCCQ504Y2 493 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 MPPE1Q53F39 396 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 N4BP2L1Q5TBK1 243 aaPredicted RBP12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 KIAA1211LQ6NV74 962 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 ANKS1BQ7Z6G8 1248 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 RABEPKQ7Z6M1 372 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 UBR7Q8N806 425 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 EHBP1Q8NDI1 1231 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 SLC35F5Q8WV83 523 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 IRGQQ8WZA9 623 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 EDEM1Q92611 657 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 GOLGA1Q92805 767 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 PIWIL1Q96J94 861 aaKnown RBP12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 CNTNAP3BQ96NU0 1288 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 CNTNAP3Q9BZ76 1288 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 TMEM74BQ9NUR3 256 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 THAP10Q9P2Z0 257 aaPredicted RBP12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 PILRBQ9UKJ0 227 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 STON1Q9Y6Q2 735 aa12.97□□□□□ -0.33
CAPRIN1-213ENST00000533562 IGHV1OR15-9A0A0B4J2B8 117 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 WASH3PC4AMC7 463 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 RNF225M0QZC1 329 aaPredicted RBP12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 BIN1O00499 593 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 CDX4O14627 284 aaPredicted RBP12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 SYNCRIPO60506 623 aaKnown RBP12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 NDUFS2O75306 463 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 LATS1O95835 1130 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 BMP6P22004 513 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 ITPKAP23677 461 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 DAOAP59103 153 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 GCNT1Q02742 428 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 ARID5AQ03989 594 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 ZNF33AQ06730 810 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 KCNH2Q12809 1159 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 PAK1Q13153 545 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 EIF4HQ15056 248 aaKnown RBP12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 GEN1Q17RS7 908 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 DUOXA1Q1HG43 343 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 ADGRF1Q5T601 910 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 PMF1Q6P1K2 205 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 SLC23A3Q6PIS1 610 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 RRAGAQ7L523 313 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 BHLHA9Q7RTU4 235 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 UNC45BQ8IWX7 931 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 FAM217AQ8IXS0 508 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 LMO3Q8TAP4 145 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 TFAP2BQ92481 460 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 TMA16Q96EY4 203 aaKnown RBP12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 P2RY11Q96G91 374 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 MRGPRX1Q96LB2 322 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 HSFY1Q96LI6 401 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 CD248Q9HCU0 757 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 ELOVL2Q9NXB9 296 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 SFMBT1Q9UHJ3 866 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 CTNND2Q9UQB3 1225 aa12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.96□□□□□ -0.33
CAPRIN1-213ENST00000533562 RAD54BQ9Y620 910 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms