RNA–Protein interactions for RNA: ENST00000532541.5

LINC00958-206, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 1,124 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-206ENST00000532541 TMEM8AQ9HCN3 771 aa8.37□□□□□ -1.07
LINC00958-206ENST00000532541 CISHQ9NSE2 258 aa8.37□□□□□ -1.07
LINC00958-206ENST00000532541 SUSD2Q9UGT4 822 aa8.37□□□□□ -1.07
LINC00958-206ENST00000532541 RCOR1Q9UKL0 485 aa8.37□□□□□ -1.07
LINC00958-206ENST00000532541 AGO1Q9UL18 857 aaKnown RBP8.37□□□□□ -1.07
LINC00958-206ENST00000532541 STARD13Q9Y3M8 1113 aa8.37□□□□□ -1.07
LINC00958-206ENST00000532541 LAMA1P25391 3075 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 CACNA1EQ15878 2313 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 A0A1W2PQD8 194 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 SRRM3A6NNA2 597 aaPredicted RBP8.36□□□□□ -1.07
LINC00958-206ENST00000532541 MSI1O43347 362 aaKnown RBP8.36□□□□□ -1.07
LINC00958-206ENST00000532541 LCP1P13796 627 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 CD59P13987 128 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 CMA1P23946 247 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 HOXD12P35452 270 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 CHKAP35790 457 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 TPMTP51580 245 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 ADIGQ0VDE8 80 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 TRIP6Q15654 476 aaKnown RBP8.36□□□□□ -1.07
LINC00958-206ENST00000532541 DCAF12L1Q5VU92 463 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 FYB2Q5VWT5 728 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 PEAR1Q5VY43 1037 aaPredicted RBP8.36□□□□□ -1.07
LINC00958-206ENST00000532541 KRT39Q6A163 491 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 ATL3Q6DD88 541 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 C19orf48Q6RUI8 117 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 FMNL3Q8IVF7 1028 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 SIX6OS1Q8N1H7 587 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 ARHGAP18Q8N392 663 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 SLC4A11Q8NBS3 891 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 UBA3Q8TBC4 463 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 GANCQ8TET4 914 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 RNF139Q8WU17 664 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 FOXJ1Q92949 421 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 TATDN2Q93075 761 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 TMEM176AQ96HP8 235 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 CDK5RAP1Q96SZ6 601 aaKnown RBP8.36□□□□□ -1.07
LINC00958-206ENST00000532541 DCLK3Q9C098 648 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 FAM124BQ9H5Z6 455 aaPredicted RBP8.36□□□□□ -1.07
LINC00958-206ENST00000532541 IL21RQ9HBE5 538 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 SFMBT1Q9UHJ3 866 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 USP25Q9UHP3 1055 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 EIF2B4Q9UI10 523 aaKnown RBP8.36□□□□□ -1.07
LINC00958-206ENST00000532541 CLEC4EQ9ULY5 219 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 LHX6Q9UPM6 363 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 TRAF3IP3Q9Y228 551 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 ZNF510Q9Y2H8 683 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 NEUROG3Q9Y4Z2 214 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 CACNA1GO43497 2377 aa8.36□□□□□ -1.07
LINC00958-206ENST00000532541 PCDH15Q96QU1 1955 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 A0A1B0GTW7 788 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 TMEM8BA6NDV4 472 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 FAM47DPA6NHR8 397 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 KCNJ18B7U540 433 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 TULP2O00295 520 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 GFRA2O00451 464 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 CETN3O15182 167 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 RHOBTB3O94955 611 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 ZBED1O96006 694 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 MYL1P05976 194 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 FTH1P19P0C7X4 201 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 HOXB3P14651 431 aaPredicted RBP8.35□□□□□ -1.07
LINC00958-206ENST00000532541 HARS2P49590 506 aaKnown RBP8.35□□□□□ -1.07
LINC00958-206ENST00000532541 NUMBP49757 651 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 RGS7P49802 495 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 RAD23BP54727 409 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 PDE4CQ08493 712 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 DPYDQ12882 1025 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 COL9A2Q14055 689 aaPredicted RBP8.35□□□□□ -1.07
LINC00958-206ENST00000532541 KLHDC10Q6PID8 442 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 LAYNQ6UX15 382 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 KRBA2Q6ZNG9 492 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 CHST9Q7L1S5 443 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 PIP4P1Q86T03 277 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 KDF1Q8NAX2 398 aaPredicted RBP8.35□□□□□ -1.07
LINC00958-206ENST00000532541 FBXL13Q8NEE6 735 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 ZNF419Q96HQ0 510 aaPredicted RBP8.35□□□□□ -1.07
LINC00958-206ENST00000532541 TSG101Q99816 390 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 TMEM121BQ9BXQ6 578 aaPredicted RBP8.35□□□□□ -1.07
LINC00958-206ENST00000532541 LHX5Q9H2C1 402 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 GOLPH3LQ9H4A5 285 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 GAREM1Q9H706 876 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 PNPLA8Q9NP80 782 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 RAB20Q9NX57 234 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 ELOVL2Q9NXB9 296 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 WSB2Q9NYS7 404 aaPredicted RBP8.35□□□□□ -1.07
LINC00958-206ENST00000532541 CLIC5Q9NZA1 410 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 STIM2Q9P246 746 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 THAP10Q9P2Z0 257 aaPredicted RBP8.35□□□□□ -1.07
LINC00958-206ENST00000532541 HESX1Q9UBX0 185 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 TSPAN16Q9UKR8 245 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 WASF3Q9UPY6 502 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 MSRB2Q9Y3D2 182 aa8.35□□□□□ -1.07
LINC00958-206ENST00000532541 A0A1B0GVT2 93 aa8.34□□□□□ -1.07
LINC00958-206ENST00000532541 PCNX2A6NKB5 2137 aa8.34□□□□□ -1.07
LINC00958-206ENST00000532541 KCNK3O14649 394 aa8.34□□□□□ -1.07
LINC00958-206ENST00000532541 MAPK13O15264 365 aa8.34□□□□□ -1.07
LINC00958-206ENST00000532541 BCAT2O15382 392 aaPredicted RBP8.34□□□□□ -1.07
LINC00958-206ENST00000532541 STX10O60499 249 aa8.34□□□□□ -1.07
LINC00958-206ENST00000532541 FSBPO95073 299 aa8.34□□□□□ -1.07
LINC00958-206ENST00000532541 PENKP01210 267 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms