RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 VPS11Q9H270 941 aa11.99□□□□□ -0.49
CSRP1-215ENST00000532313 WBP1LQ9NX94 342 aa11.99□□□□□ -0.49
CSRP1-215ENST00000532313 EIF4E1BA6NMX2 242 aaKnown RBP11.98□□□□□ -0.49
CSRP1-215ENST00000532313 DAB1O75553 588 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 COMTP21964 271 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 WARSP23381 471 aaKnown RBP11.98□□□□□ -0.49
CSRP1-215ENST00000532313 TYK2P29597 1187 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 PDIA2Q13087 525 aaKnown RBP11.98□□□□□ -0.49
CSRP1-215ENST00000532313 SH2D4BQ5SQS7 431 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 EXD1Q8NHP7 514 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 CYTH2Q99418 400 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 OSGEPL1Q9H4B0 414 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 LRRC40Q9H9A6 602 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 NT5MQ9NPB1 228 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 RBM22Q9NW64 420 aaKnown RBP eCLIP11.98□□□□□ -0.497e-6■■■□□ 17.4
CSRP1-215ENST00000532313 VPS18Q9P253 973 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 NDRG2Q9UN36 371 aaKnown RBP11.98□□□□□ -0.49
CSRP1-215ENST00000532313 ADGRA3Q8IWK6 1321 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 CCDC78A2IDD5 438 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 CHRM3P20309 590 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 PDCLQ13371 301 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 C12orf50Q8NA57 414 aaPredicted RBP11.98□□□□□ -0.49
CSRP1-215ENST00000532313 BTN2A3PQ96KV6 586 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 RGS18Q9NS28 235 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 MRGBPQ9NV56 204 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 A0A0A6YYK5 440 aaPredicted RBP11.98□□□□□ -0.49
CSRP1-215ENST00000532313 MAGEB16A2A368 324 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 HSPA4LO95757 839 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 APOA4P06727 396 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 GFAPP14136 432 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 ITIH2P19823 946 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 EDNRBP24530 442 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 DAB2P98082 770 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 SLC20A2Q08357 652 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 TAF10Q12962 218 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 STAT4Q14765 748 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 COBLL1Q53SF7 1204 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 ZDHHC20Q5W0Z9 365 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 HDDC3Q8N4P3 179 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 HEXDCQ8WVB3 486 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 SUSD3Q96L08 255 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 NKX2-4Q9H2Z4 354 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 WDR41Q9HAD4 459 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 RAD54BQ9Y620 910 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 ARFGEF2Q9Y6D5 1785 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 H3BM21 787 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 PHF2O75151 1096 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 TTC4O95801 387 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 SPATA31D3P0C874 917 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 HADHAP40939 763 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 ZNF211Q13398 564 aaPredicted RBP11.98□□□□□ -0.49
CSRP1-215ENST00000532313 DDR2Q16832 855 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 TAPT1Q6NXT6 567 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 EMBQ6PCB8 327 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 TMC5Q6UXY8 1006 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 SPATA31D4Q6ZUB0 917 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 PPM1NQ8N819 430 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 MCOLN3Q8TDD5 553 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 ALG6Q9Y672 507 aa11.98□□□□□ -0.49
CSRP1-215ENST00000532313 INPPL1O15357 1258 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 ZNF131P52739 623 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 SUZ12Q15022 739 aaKnown RBP11.97□□□□□ -0.49
CSRP1-215ENST00000532313 NT5DC1Q5TFE4 455 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 CYB5D1Q6P9G0 228 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 RUBCNQ92622 972 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 CNOT10Q9H9A5 744 aaKnown RBP11.97□□□□□ -0.49
CSRP1-215ENST00000532313 TTC7AQ9ULT0 858 aaPredicted RBP11.97□□□□□ -0.49
CSRP1-215ENST00000532313 SNED1Q8TER0 1413 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 H3BMM5 538 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 ENPP3O14638 875 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 IL1BP01584 269 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 BMPR1AP36894 532 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 CLCNKBP51801 687 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 IRX4P78413 519 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 RTL10Q7L3V2 364 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 BSNDQ8WZ55 320 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 CABS1Q96KC9 395 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 PANX3Q96QZ0 392 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 OSBPL9Q96SU4 736 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 PCDHA11Q9Y5I1 949 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 ADGRG1Q9Y653 693 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 RHOBTB1O94844 696 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 HMOX2P30519 316 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 CLCN1P35523 988 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 FBXW4P57775 412 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 LBRQ14739 615 aaKnown RBP11.97□□□□□ -0.49
CSRP1-215ENST00000532313 CHRDL2Q6WN34 429 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 ZNF655Q8N720 491 aaPredicted RBP11.97□□□□□ -0.49
CSRP1-215ENST00000532313 SDCCAG3Q96C92 435 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 FBXL18Q96ME1 805 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 ZFP42Q96MM3 310 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 NTPCRQ9BSD7 190 aaKnown RBP11.97□□□□□ -0.49
CSRP1-215ENST00000532313 ABCB6Q9NP58 842 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 STRCP1A6NGW2 1772 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 NUP188Q5SRE5 1749 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 SERPIND1P05546 499 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 OR56A5P0C7T3 313 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 EVX2Q03828 476 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 LPIN1Q14693 890 aa11.97□□□□□ -0.49
CSRP1-215ENST00000532313 E4F1Q66K89 784 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms