RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 TFCP2L1Q9NZI6 479 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 PCDHB7Q9Y5E2 793 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 PCDHB2Q9Y5E7 798 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 LOC105369274A0A096LPK9 316 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 LOC102723532A0A0G2JNH3 316 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 H0Y3Z8 333 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 HNRNPCP07910 306 aaKnown RBP eCLIP6.8□□□□□ -1.32
CASP4-208ENST00000530309 WT1P19544 449 aaPredicted RBP6.8□□□□□ -1.32
CASP4-208ENST00000530309 THBS4P35443 961 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 COPB1P53618 953 aaKnown RBP6.8□□□□□ -1.32
CASP4-208ENST00000530309 PRKAA2P54646 552 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 CFHR3Q02985 330 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 SF3A3Q12874 501 aaKnown RBP eCLIP6.8□□□□□ -1.32
CASP4-208ENST00000530309 RPS6KA2Q15349 733 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 FAM187BQ17R55 369 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 ADCK5Q3MIX3 580 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 TMEM63BQ5T3F8 832 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 CEP85Q6P2H3 762 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 ACSM6Q6P461 480 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 RRAGAQ7L523 313 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 BCDIN3DQ7Z5W3 292 aaKnown RBP6.8□□□□□ -1.32
CASP4-208ENST00000530309 OR4N4Q8N0Y3 316 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 HMGB4Q8WW32 186 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 CPT1BQ92523 772 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 NPIPB3Q92617 1050 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 C3orf49Q96BT1 292 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 SDCCAG3Q96C92 435 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 ZSCAN31Q96LW9 406 aaPredicted RBP6.8□□□□□ -1.32
CASP4-208ENST00000530309 UROC1Q96N76 676 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 MMS19Q96T76 1030 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 MACROD1Q9BQ69 325 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 DUSP26Q9BV47 211 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 MECRQ9BV79 373 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 SEPSECSQ9HD40 501 aaKnown RBP6.8□□□□□ -1.32
CASP4-208ENST00000530309 ING1Q9UK53 422 aaPredicted RBP6.8□□□□□ -1.32
CASP4-208ENST00000530309 TLK1Q9UKI8 766 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 ZBTB1Q9Y2K1 713 aa6.8□□□□□ -1.32
CASP4-208ENST00000530309 CYR61O00622 381 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 EXOC3O60645 756 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 PRAMEF2O60811 474 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 FSHBP01225 129 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 APEHP13798 732 aaKnown RBP6.79□□□□□ -1.32
CASP4-208ENST00000530309 IGHMBP2P38935 993 aaKnown RBP6.79□□□□□ -1.32
CASP4-208ENST00000530309 HOXA4Q00056 320 aaPredicted RBP6.79□□□□□ -1.32
CASP4-208ENST00000530309 CUL4BQ13620 913 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 CBFBQ13951 182 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 AAK1Q2M2I8 961 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 FBXO47Q5MNV8 452 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 AKNAD1Q5T1N1 836 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 FTSJ3Q8IY81 847 aaKnown RBP6.79□□□□□ -1.32
CASP4-208ENST00000530309 LINC01465Q8N7H1 131 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 SIMC1Q8NDZ2 872 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 OR52L2PQ8NGH6 319 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 GPR150Q8NGU9 434 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 DAZAP1Q96EP5 407 aaKnown RBP6.79□□□□□ -1.32
CASP4-208ENST00000530309 REXO5Q96IC2 774 aaKnown RBP6.79□□□□□ -1.32
CASP4-208ENST00000530309 FAR2Q96K12 515 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 KRTAP4-9Q9BYQ8 210 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 CPNE5Q9HCH3 593 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 LIN7CQ9NUP9 197 aaKnown RBP6.79□□□□□ -1.32
CASP4-208ENST00000530309 NDUFAF4Q9P032 175 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 FZD4Q9ULV1 537 aa6.79□□□□□ -1.32
CASP4-208ENST00000530309 SLC38A8A6NNN8 435 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 B9A039 149 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 M0QYT0 321 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 JTBO76095 146 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 MT-CO3P00414 261 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 C1RP00736 705 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 MBPP02686 304 aaPredicted RBP6.78□□□□□ -1.32
CASP4-208ENST00000530309 MATN1P21941 496 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 SERPINA4P29622 427 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 GALNSP34059 522 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 AARSP49588 968 aaKnown RBP eCLIP6.78□□□□□ -1.32
CASP4-208ENST00000530309 JAK3P52333 1124 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 RAE1P78406 368 aaKnown RBP6.78□□□□□ -1.32
CASP4-208ENST00000530309 TBRG1Q3YBR2 411 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 ANKRD45Q5TZF3 282 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 PCSK4Q6UW60 755 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 C16orf89Q6UX73 402 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 TRIM72Q6ZMU5 477 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 GLMPQ8WWB7 406 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 SCAND2PQ9GZW5 306 aaPredicted RBP6.78□□□□□ -1.32
CASP4-208ENST00000530309 TWSG1Q9GZX9 223 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 PCED1AQ9H1Q7 454 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 SAGE1Q9NXZ1 904 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 GAR1Q9NY12 217 aaKnown RBP6.78□□□□□ -1.32
CASP4-208ENST00000530309 ADAM21Q9UKJ8 722 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 VPS4AQ9UN37 437 aa6.78□□□□□ -1.32
CASP4-208ENST00000530309 NKX2-8O15522 239 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 DUSP1P28562 367 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 GALNTL6Q49A17 601 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 ANKRD40Q6AI12 368 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 CYP26C1Q6V0L0 522 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 MAFAQ8NHW3 353 aaPredicted RBP6.77□□□□□ -1.33
CASP4-208ENST00000530309 CSGALNACT1Q8TDX6 532 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 AFG1LQ8WV93 481 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 RILPL2Q969X0 211 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 KAZALD1Q96I82 304 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 KLK15Q9H2R5 256 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 CDCP1Q9H5V8 836 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms