RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 SNRNP27Q8WVK2 155 aaKnown RBP17.1■□□□□ 0.33
CHMP4A-203ENST00000527154 TMEM176AQ96HP8 235 aa17.1■□□□□ 0.33
CHMP4A-203ENST00000527154 EPSTI1Q96J88 318 aa17.1■□□□□ 0.33
CHMP4A-203ENST00000527154 CGRRF1Q99675 332 aa17.1■□□□□ 0.33
CHMP4A-203ENST00000527154 NACA2Q9H009 215 aa17.1■□□□□ 0.33
CHMP4A-203ENST00000527154 CLMPQ9H6B4 373 aa17.1■□□□□ 0.33
CHMP4A-203ENST00000527154 NMUR1Q9HB89 426 aa17.1■□□□□ 0.33
CHMP4A-203ENST00000527154 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
CHMP4A-203ENST00000527154 HSPBP1Q9NZL4 362 aa17.1■□□□□ 0.33
CHMP4A-203ENST00000527154 MYH10P35580 1976 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 AP1G2O75843 785 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 CHKAP35790 457 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 RHDQ02161 417 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 PSMD6Q15008 389 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 TBC1D25Q3MII6 688 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 HES3Q5TGS1 186 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 ZNF516Q92618 1163 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 ELF4Q99607 663 aaPredicted RBP17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 SLC2A11Q9BYW1 496 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 KRT82Q9NSB4 513 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 CLEC4EQ9ULY5 219 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 ZNF510Q9Y2H8 683 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 SSUH2Q9Y2M2 353 aa17.09■□□□□ 0.33
CHMP4A-203ENST00000527154 PTPN13Q12923 2485 aa17.08■□□□□ 0.33
CHMP4A-203ENST00000527154 ARID1BQ8NFD5 2236 aaPredicted RBP17.08■□□□□ 0.33
CHMP4A-203ENST00000527154 TIMM44O43615 452 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 BRINP1O60477 761 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 SEMA4FO95754 770 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 IGHV4-34P06331 123 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 EPHX1P07099 455 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 MYL6P60660 151 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 RACK1P63244 317 aaKnown RBP17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 ILKQ13418 452 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 GPRIN1Q7Z2K8 1008 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 CRYBG2Q8N1P7 616 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 RASSF8Q8NHQ8 419 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 BHMTQ93088 406 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 CNDP2Q96KP4 475 aaKnown RBP17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 TNIP3Q96KP6 325 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 SEMA4CQ9C0C4 833 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 LHX5Q9H2C1 402 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 SMYD3Q9H7B4 428 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 FBRSQ9HAH7 460 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 PNPLA8Q9NP80 782 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 KIF3AQ9Y496 699 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 AK5Q9Y6K8 562 aa17.08■□□□□ 0.32
CHMP4A-203ENST00000527154 B8ZZF3 427 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 CBX4O00257 560 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 ARHGAP6O43182 974 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 LDOC1O95751 146 aaPredicted RBP17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 DNAJC3Q13217 504 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 SNRNP35Q16560 246 aaKnown RBP17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 BMT2Q1RMZ1 405 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 CCDC157Q569K6 752 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 SFMBT2Q5VUG0 894 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 SV2BQ7L1I2 683 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 FAM124AQ86V42 546 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 CPXM2Q8N436 756 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 DCBLD1Q8N8Z6 715 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 SNX19Q92543 992 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 TTC9Q92623 222 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 SYAP1Q96A49 352 aaPredicted RBP17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 HIC2Q96JB3 615 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 BTBD1Q9H0C5 482 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 SDCBP2Q9H190 292 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 SGK2Q9HBY8 427 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 MYLKQ15746 1914 aa17.07■□□□□ 0.32
CHMP4A-203ENST00000527154 BSNQ9UPA5 3926 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 MDM4O15151 490 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 CYP26A1O43174 497 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 TGFB1I1O43294 461 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 RARGP13631 454 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 ACTN2P35609 894 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 CXADRP78310 365 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 IL9RQ01113 521 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 CYP24A1Q07973 514 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 SERPINA13PQ6UXR4 307 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 KANSL1Q7Z3B3 1105 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 KIAA0907Q7Z7F0 614 aaPredicted RBP17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 GATAD2AQ86YP4 633 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 SORCS1Q8WY21 1168 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 CLIC5Q9NZA1 410 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 NXF1Q9UBU9 619 aaKnown RBP17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 PCDHA5Q9Y5H7 936 aa17.06■□□□□ 0.32
CHMP4A-203ENST00000527154 A0A1W2PPC4 97 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 TULP1O00294 542 aaPredicted RBP17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 YKT6O15498 198 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 WNT1P04628 370 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 DLATP10515 647 aaKnown RBP17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 TNNI1P19237 187 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 PSEN1P49768 467 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 BCAT1P54687 386 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 RPS14P62263 151 aaKnown RBP17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 CLDN10P78369 228 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 SRSF1Q07955 248 aaKnown RBP eCLIP17.05■□□□□ 0.323e-6■□□□□ 8.3
CHMP4A-203ENST00000527154 KCNH2Q12809 1159 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 CLEC20AQ6ZU45 233 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 SCD5Q86SK9 330 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms