RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 PDZD8Q8NEN9 1154 aa21.28■■□□□ 1
SMCO4-203ENST00000526869 ADAM32Q8TC27 787 aa21.28■■□□□ 1
SMCO4-203ENST00000526869 IFT81Q8WYA0 676 aa21.28■■□□□ 1
SMCO4-203ENST00000526869 CCDC114Q96M63 670 aa21.28■■□□□ 1
SMCO4-203ENST00000526869 SERPINB11Q96P15 392 aa21.28■■□□□ 1
SMCO4-203ENST00000526869 PLEKHA4Q9H4M7 779 aa21.28■■□□□ 1
SMCO4-203ENST00000526869 WDCPQ9H6R7 721 aa21.28■■□□□ 1
SMCO4-203ENST00000526869 LZTS1Q9Y250 596 aa21.28■■□□□ 1
SMCO4-203ENST00000526869 RWDD3Q9Y3V2 267 aa21.28■■□□□ 1
SMCO4-203ENST00000526869 SYNJ2BP-COX16A0A087WUM0 186 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 MCF2LO15068 1137 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 SOAT2O75908 522 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 ZDHHC11BP0C7U3 371 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 RBM10P98175 930 aaKnown RBP21.27■■□□□ 1
SMCO4-203ENST00000526869 SEMA3BQ13214 749 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 PPP2R5DQ14738 602 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 ALLCQ8N6M5 410 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 PLD5Q8N7P1 536 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 CCDC89Q8N998 374 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 P3H4Q92791 437 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 HINFPQ9BQA5 517 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 UBE2OQ9C0C9 1292 aaKnown RBP21.27■■□□□ 1
SMCO4-203ENST00000526869 ARHGEF38Q9NXL2 777 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 CWC15Q9P013 229 aaKnown RBP21.27■■□□□ 1
SMCO4-203ENST00000526869 COX16Q9P0S2 106 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 NFU1Q9UMS0 254 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 ZNF148Q9UQR1 794 aa21.27■■□□□ 1
SMCO4-203ENST00000526869 TLL1O43897 1013 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 SEC31AO94979 1220 aaKnown RBP21.26■□□□□ 0.99
SMCO4-203ENST00000526869 PECAM1P16284 738 aaPredicted RBP21.26■□□□□ 0.99
SMCO4-203ENST00000526869 ECHS1P30084 290 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 HTR7P34969 479 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 NR2C2P49116 596 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 PGFP49763 221 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 TAF10Q12962 218 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 HDXQ7Z353 690 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 TCEAL8Q8IYN2 117 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 CASP10Q92851 521 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 HAUS1Q96CS2 278 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 CDK5RAP1Q96SZ6 601 aaKnown RBP21.26■□□□□ 0.99
SMCO4-203ENST00000526869 OSBPL2Q9H1P3 480 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 DPH5Q9H2P9 285 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.26■□□□□ 0.99
SMCO4-203ENST00000526869 OSER1Q9NX31 292 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 WHRNQ9P202 907 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 YIPF1Q9Y548 306 aa21.26■□□□□ 0.99
SMCO4-203ENST00000526869 ZNF638Q14966 1978 aaKnown RBP21.25■□□□□ 0.99
SMCO4-203ENST00000526869 SEC24AO95486 1093 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 CSH1P0DML2 217 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 CSH2P0DML3 217 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 SLC2A3P11169 496 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 SYN1P17600 705 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 KLRC2P26717 231 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 CCR1P32246 355 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 RPL21P46778 160 aaKnown RBP21.25■□□□□ 0.99
SMCO4-203ENST00000526869 EIF3EP60228 445 aaKnown RBP21.25■□□□□ 0.99
SMCO4-203ENST00000526869 HLTFQ14527 1009 aaKnown RBP eCLIP21.25■□□□□ 0.99
SMCO4-203ENST00000526869 TRADDQ15628 312 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 SNX30Q5VWJ9 437 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 GSPT2Q8IYD1 628 aaKnown RBP21.25■□□□□ 0.99
SMCO4-203ENST00000526869 KLHL23Q8NBE8 558 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 GPR152Q8TDT2 470 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 TRMT2BQ96GJ1 504 aaKnown RBP21.25■□□□□ 0.99
SMCO4-203ENST00000526869 MYRFLQ96LU7 910 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 HAPLN3Q96S86 360 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 FAM118BQ9BPY3 351 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 FUT8Q9BYC5 575 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 TKTL2Q9H0I9 626 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 GRHL1Q9NZI5 618 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 PCDH10Q9P2E7 1040 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 ZMYND8Q9ULU4 1186 aaPredicted RBP21.25■□□□□ 0.99
SMCO4-203ENST00000526869 TLR6Q9Y2C9 796 aa21.25■□□□□ 0.99
SMCO4-203ENST00000526869 CFAP69A5D8W1 941 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 EEF2KO00418 725 aaKnown RBP21.24■□□□□ 0.99
SMCO4-203ENST00000526869 NDC80O14777 642 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 ZNF189O75820 626 aaPredicted RBP21.24■□□□□ 0.99
SMCO4-203ENST00000526869 KRT14P02533 472 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 RARGP13631 454 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 GOT1P17174 413 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 BMPR1AP36894 532 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 ALDH1A3P47895 512 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 XRCC4Q13426 336 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 MTMR3Q13615 1198 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 DPYSQ14117 519 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 VEPH1Q14D04 833 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 BZW1Q7L1Q6 419 aaKnown RBP21.24■□□□□ 0.99
SMCO4-203ENST00000526869 GSTA5Q7RTV2 222 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 DDX42Q86XP3 938 aaKnown RBP eCLIP21.24■□□□□ 0.99
SMCO4-203ENST00000526869 PYROXD2Q8N2H3 581 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 BBOF1Q8ND07 529 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 STKLD1Q8NE28 680 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 GIPC2Q8TF65 315 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 RNF34Q969K3 372 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 SNF8Q96H20 258 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 EPAS1Q99814 870 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 CYP4F11Q9HBI6 524 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 PCDH9Q9HC56 1237 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 ANLNQ9NQW6 1124 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 ARHGEF4Q9NR80 690 aa21.24■□□□□ 0.99
SMCO4-203ENST00000526869 ZDHHC18Q9NUE0 388 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms