RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 ST6GAL1P15907 406 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 TFEBP19484 476 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 DUSP1P28562 367 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 ARRB2P32121 409 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 POLD2P49005 469 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 CARSP49589 748 aaKnown RBP4.81□□□□□ -1.64
CSDE1-210ENST00000525878 MTA1Q13330 715 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 TTLL5Q6EMB2 1281 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 RFX6Q8HWS3 928 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 P3H2Q8IVL5 708 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 IPCEF1Q8WWN9 437 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-210ENST00000525878 SELENONQ9NZV5 590 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 ITGB1BP2Q9UKP3 347 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 OGDHLQ9ULD0 1010 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 HEMK1Q9Y5R4 338 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-210ENST00000525878 PRPF4O43172 522 aaKnown RBP eCLIP4.8□□□□□ -1.645e-7■■■■□ 22.3
CSDE1-210ENST00000525878 KRT86O43790 486 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 MT-ND5P03915 603 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 HRGP04196 525 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 NGFRP08138 427 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 HOXD12P35452 270 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 DGKQP52824 942 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 GAB1Q13480 694 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 KRT81Q14533 505 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 INPP5JQ15735 1006 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-210ENST00000525878 CNGA3Q16281 694 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 ODF3L2Q3SX64 289 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 RNF220Q5VTB9 566 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 B4GALNT4Q76KP1 1039 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 FSTL5Q8N475 847 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-210ENST00000525878 WDR24Q96S15 920 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 VPS33BQ9H267 617 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 FAM204AQ9H8W3 233 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 ZNF287Q9HBT7 754 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 RXFP3Q9NSD7 469 aa4.8□□□□□ -1.64
CSDE1-210ENST00000525878 SPATA31A5Q5VU36 1347 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 SPATA31A7Q8IWB4 1347 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 PBX1P40424 430 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 ZNF84P51523 738 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 HYAL1Q12794 435 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 MINDY4Q4G0A6 757 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 FAM102BQ5T8I3 360 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 SDR16C5Q8N3Y7 309 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 CELF1Q92879 486 aaKnown RBP4.79□□□□□ -1.64
CSDE1-210ENST00000525878 GJA10Q969M2 543 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 FAM84BQ96KN1 310 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-210ENST00000525878 SENP7Q9BQF6 1050 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 AS3MTQ9HBK9 375 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 THSD1Q9NS62 852 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 ZNF212Q9UDV6 495 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 ICKQ9UPZ9 632 aa4.79□□□□□ -1.64
CSDE1-210ENST00000525878 ZNF335Q9H4Z2 1342 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-210ENST00000525878 KIR2DS5A0A0G2JLQ3 304 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 KIR2DS3K7RE56 304 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 TGFB3P10600 412 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 TNFRSF8P28908 595 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 P2RX3P56373 397 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 ANAPC15P60006 121 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 FAM90A2PQ658T7 463 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 CHST15Q7LFX5 561 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-210ENST00000525878 SKAP1Q86WV1 359 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 UEVLDQ8IX04 471 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 SNX22Q96L94 193 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 MEIS3Q99687 375 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 PIMREGQ9BSJ6 248 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 ARHGAP39Q9C0H5 1083 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 SLC25A32Q9H2D1 315 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 ASNSD1Q9NWL6 643 aa4.78□□□□□ -1.64
CSDE1-210ENST00000525878 THRAP3Q9Y2W1 955 aaKnown RBP4.78□□□□□ -1.64
CSDE1-210ENST00000525878 hCG_2014768A0A024R1R8 64 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 GOLIM4O00461 696 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 UGDHO60701 494 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 MAP4K4O95819 1239 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-210ENST00000525878 NDUFS1P28331 727 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 VPS41P49754 854 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 PPATQ06203 517 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 PTGR1Q14914 329 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 PIK3CD-AS1Q5SR53 167 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 NUGGCQ68CJ6 796 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 NXNQ6DKJ4 435 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 ADGRF4Q8IZF3 695 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 FAM156AQ8NDB6 213 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 AKAP1Q92667 903 aaKnown RBP eCLIP4.77□□□□□ -1.65
CSDE1-210ENST00000525878 MIB2Q96AX9 1013 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 ZNF845Q96IR2 970 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-210ENST00000525878 FZD3Q9NPG1 666 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 VPS4AQ9UN37 437 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 PCDHA7Q9UN72 937 aa4.77□□□□□ -1.65
CSDE1-210ENST00000525878 A0A087WZ62 844 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 ZC3H11AO75152 810 aaKnown RBP eCLIP4.76□□□□□ -1.65
CSDE1-210ENST00000525878 SGPL1O95470 568 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 ZBED1O96006 694 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 ARP10275 920 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 MATN1P21941 496 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 CDC25AP30304 524 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 DLGAP5Q15398 846 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 ASIC2Q16515 512 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 SMTNL2Q2TAL5 461 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 ASPHD1Q5U4P2 390 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 ZNF324BQ6AW86 544 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms