RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 UBE2HP62256 183 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 KCNH2Q12809 1159 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 TRIP4Q15650 581 aaPredicted RBP9.88□□□□□ -0.83
SF3B2-204ENST00000525207 MAP7D1Q3KQU3 841 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 MSANTD2Q6P1R3 559 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 DENND1CQ8IV53 801 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 FMNL3Q8IVF7 1028 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 CHPFQ8IZ52 775 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 UBA3Q8TBC4 463 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 SLC35F5Q8WV83 523 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 RLN3Q8WXF3 142 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 NDRG1Q92597 394 aaKnown RBP9.88□□□□□ -0.83
SF3B2-204ENST00000525207 KREMEN1Q96MU8 473 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 ACOX2Q99424 681 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 EDEM2Q9BV94 578 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 HBS1LQ9Y450 684 aaKnown RBP9.88□□□□□ -0.83
SF3B2-204ENST00000525207 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.88□□□□□ -0.83
SF3B2-204ENST00000525207 GON4LQ3T8J9 2241 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 PCDH15Q96QU1 1955 aa9.88□□□□□ -0.83
SF3B2-204ENST00000525207 TPRP12270 2363 aaKnown RBP9.87□□□□□ -0.83
SF3B2-204ENST00000525207 RNF225M0QZC1 329 aaPredicted RBP9.87□□□□□ -0.83
SF3B2-204ENST00000525207 GFRA2O00451 464 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 MSI1O43347 362 aaKnown RBP9.87□□□□□ -0.83
SF3B2-204ENST00000525207 GABBR2O75899 941 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 LATS1O95835 1130 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 CYBBP04839 570 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 NDUFV2P19404 249 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 HOXD9P28356 352 aaPredicted RBP9.87□□□□□ -0.83
SF3B2-204ENST00000525207 RGS7P49802 495 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 ZNF445P59923 1031 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 EIF4HQ15056 248 aaKnown RBP9.87□□□□□ -0.83
SF3B2-204ENST00000525207 CNGA2Q16280 664 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 GEN1Q17RS7 908 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 PPM1JQ5JR12 505 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 BSPRYQ5W0U4 402 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 IL31Q6EBC2 164 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 KIAA1211LQ6NV74 962 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 PMF1Q6P1K2 205 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 RRAGAQ7L523 313 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 ANKS1BQ7Z6G8 1248 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 IPO4Q8TEX9 1081 aaKnown RBP9.87□□□□□ -0.83
SF3B2-204ENST00000525207 RNF139Q8WU17 664 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 IRGQQ8WZA9 623 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 DDX1Q92499 740 aaKnown RBP9.87□□□□□ -0.83
SF3B2-204ENST00000525207 EDEM1Q92611 657 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 SRRTQ9BXP5 876 aaKnown RBP9.87□□□□□ -0.83
SF3B2-204ENST00000525207 INTS2Q9H0H0 1204 aaKnown RBP9.87□□□□□ -0.83
SF3B2-204ENST00000525207 ABCC13Q9NSE7 274 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 CACNA2D2Q9NY47 1150 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 KIAA1468Q9P260 1216 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 SFMBT1Q9UHJ3 866 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 MBD1Q9UIS9 605 aaPredicted RBP9.87□□□□□ -0.83
SF3B2-204ENST00000525207 RWDD2AQ9UIY3 292 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 STOML2Q9UJZ1 356 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 CNTN6Q9UQ52 1028 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 CACNA1EQ15878 2313 aa9.87□□□□□ -0.83
SF3B2-204ENST00000525207 IGHV1OR15-9A0A0B4J2B8 117 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 TM4SF5O14894 197 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 NPC1O15118 1278 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 FBXO21O94952 628 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 FGFR1OPO95684 399 aaKnown RBP9.86□□□□□ -0.83
SF3B2-204ENST00000525207 CALCAP01258 141 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 IGLV3-27P01718 113 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 LTFP02788 710 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 ADRB1P08588 477 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 LCP1P13796 627 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 PTGER3P43115 390 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 DHPSP49366 369 aaPredicted RBP9.86□□□□□ -0.83
SF3B2-204ENST00000525207 HARS2P49590 506 aaKnown RBP9.86□□□□□ -0.83
SF3B2-204ENST00000525207 ENPP2Q13822 863 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 BYSLQ13895 437 aaKnown RBP9.86□□□□□ -0.83
SF3B2-204ENST00000525207 MEA1Q16626 185 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 SPDYCQ5MJ68 293 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 STPG1Q5TH74 334 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 PEAR1Q5VY43 1037 aaPredicted RBP9.86□□□□□ -0.83
SF3B2-204ENST00000525207 RNF43Q68DV7 783 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 ARMCX6Q7L4S7 300 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 LPCAT2Q7L5N7 544 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 PGBD3Q8N328 593 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 FRMD1Q8N878 549 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 EHBP1Q8NDI1 1231 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 CLEC4CQ8WTT0 213 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 PIWIL1Q96J94 861 aaKnown RBP9.86□□□□□ -0.83
SF3B2-204ENST00000525207 HSFY1Q96LI6 401 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 MED15Q96RN5 788 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 CHMP5Q9NZZ3 219 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 EVLQ9UI08 416 aaPredicted RBP9.86□□□□□ -0.83
SF3B2-204ENST00000525207 CLEC4EQ9ULY5 219 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 RAD54BQ9Y620 910 aa9.86□□□□□ -0.83
SF3B2-204ENST00000525207 ASCC3Q8N3C0 2202 aaKnown RBP9.86□□□□□ -0.83
SF3B2-204ENST00000525207 ACACBO00763 2458 aa9.85□□□□□ -0.83
SF3B2-204ENST00000525207 ATXN2Q99700 1313 aaKnown RBP9.85□□□□□ -0.83
SF3B2-204ENST00000525207 LAMA1P25391 3075 aa9.85□□□□□ -0.83
SF3B2-204ENST00000525207 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.85□□□□□ -0.83
SF3B2-204ENST00000525207 PATE3B3GLJ2 98 aa9.85□□□□□ -0.83
SF3B2-204ENST00000525207 PIK3R2O00459 728 aa9.85□□□□□ -0.83
SF3B2-204ENST00000525207 SART1O43290 800 aaKnown RBP9.85□□□□□ -0.83
SF3B2-204ENST00000525207 AP5Z1O43299 807 aa9.85□□□□□ -0.83
SF3B2-204ENST00000525207 KRT5P13647 590 aa9.85□□□□□ -0.83
SF3B2-204ENST00000525207 HOXD12P35452 270 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms