RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ACOT7O00154 380 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 DCLK1O15075 740 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 ATG13O75143 517 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 SPATA31D3P0C874 917 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 HSPD1P10809 573 aaKnown RBP7.78□□□□□ -1.16
NEDD8-203ENST00000524927 HLA-EP13747 358 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 FAHP16930 419 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 CCND1P24385 295 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 SDHAP31040 664 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 SLC16A2P36021 539 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 DPP6P42658 865 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 SCAND1P57086 179 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 NTHL1P78549 312 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 KLF1Q13351 362 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-203ENST00000524927 NEDD9Q14511 834 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 PLEKHN1Q494U1 663 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-203ENST00000524927 TANGO2Q6ICL3 276 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 SPATA31D4Q6ZUB0 917 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 FRMD7Q6ZUT3 714 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 ALG3Q92685 438 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 ZDHHC5Q9C0B5 715 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 ZMAT4Q9H898 229 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 TOPORSQ9NS56 1045 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-203ENST00000524927 ERAP1Q9NZ08 941 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 MBD1Q9UIS9 605 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-203ENST00000524927 DBNLQ9UJU6 430 aaKnown RBP7.78□□□□□ -1.16
NEDD8-203ENST00000524927 NID2Q14112 1375 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 NCANO14594 1321 aa7.78□□□□□ -1.16
NEDD8-203ENST00000524927 CACNA1DQ01668 2161 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 OTOGQ6ZRI0 2925 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 SPG11Q96JI7 2443 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-203ENST00000524927 SMIM35A0A1B0GVV1 85 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 ABLIM1O14639 778 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 PRRG2O14669 202 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 TLX3O43711 291 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-203ENST00000524927 MT-CO1P00395 513 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 MMEP08473 750 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 TSPY3P0CV98 308 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 TSPY8P0CW00 308 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 BUD31P41223 144 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-203ENST00000524927 TLE3Q04726 772 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 RNASELQ05823 741 aaKnown RBP7.77□□□□□ -1.17
NEDD8-203ENST00000524927 MCL1Q07820 350 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 CCDC96Q2M329 555 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 PREPLQ4J6C6 727 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-203ENST00000524927 CATSPEREQ5SY80 951 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 ESRP1Q6NXG1 681 aaKnown RBP7.77□□□□□ -1.17
NEDD8-203ENST00000524927 MPZL3Q6UWV2 235 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 TTLL10Q6ZVT0 673 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 HIPK4Q8NE63 616 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 TBC1D5Q92609 795 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 PIGKQ92643 395 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 NXPE2Q96DL1 559 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 TOE1Q96GM8 510 aaKnown RBP7.77□□□□□ -1.17
NEDD8-203ENST00000524927 GBP4Q96PP9 640 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 APOL6Q9BWW8 343 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 C8orf33Q9H7E9 229 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-203ENST00000524927 DTLQ9NZJ0 730 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 KCNG1Q9UIX4 513 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 DOCK6Q96HP0 2047 aa7.77□□□□□ -1.17
NEDD8-203ENST00000524927 MTORP42345 2549 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 SH3BP5O60239 455 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 KDM1AO60341 852 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 POU2F2P09086 479 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 MYCLP12524 364 aaPredicted RBP7.76□□□□□ -1.17
NEDD8-203ENST00000524927 MYF5P13349 255 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 TNFRSF8P28908 595 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 GDI1P31150 447 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 HOXA9P31269 272 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 SLC11A1P49279 550 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 EPHA7Q15375 998 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 PGM2L1Q6PCE3 622 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 TMC6Q7Z403 805 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 PALB2Q86YC2 1186 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 IRF2BP1Q8IU81 584 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 RNF169Q8NCN4 708 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 TNPO1Q92973 898 aaKnown RBP7.76□□□□□ -1.17
NEDD8-203ENST00000524927 C16orf92Q96LL3 132 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 CAMK1GQ96NX5 476 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 PDCD2LQ9BRP1 358 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 HERC2P3Q9BVR0 1158 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 KRTAP17-1Q9BYP8 105 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 FZD8Q9H461 694 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 NRDE2Q9H7Z3 1164 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 ARHGAP28Q9P2N2 729 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 SLC4A4Q9Y6R1 1079 aa7.76□□□□□ -1.17
NEDD8-203ENST00000524927 ABCA7Q8IZY2 2146 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 ICE1Q9Y2F5 2266 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 A0A0U1RQF3 1178 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 NPIPB6E9PJ23 425 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 PRDM1O75626 825 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 TMEM253P0C7T8 217 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 INSRRP14616 1297 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 ZSCAN20P17040 1043 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-203ENST00000524927 PSMC3P17980 439 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 FCARP24071 287 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 HOXD12P35452 270 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 RAB27AP51159 221 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 UCNP55089 124 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms