RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 SCN11AQ9UI33 1791 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 HSPA1AP0DMV8 641 aaKnown RBP17.55■□□□□ 0.4
BEST1-203ENST00000524877 HSPA1BP0DMV9 641 aaKnown RBP17.55■□□□□ 0.4
BEST1-203ENST00000524877 ARL2P36404 184 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 HDAC4P56524 1084 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 BCL2L1Q07817 233 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 ARHGAP1Q07960 439 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 FBXL19Q6PCT2 694 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 CASP10Q92851 521 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 LENG9Q96B70 501 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 SLC13A1Q9BZW2 595 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 PDZD7Q9H5P4 517 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 KCNA3P22001 575 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 OLFML1Q6UWY5 402 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 DENND1CQ8IV53 801 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 SLC35C1Q96A29 364 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 SPATA17Q96L03 361 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 TUBB6Q9BUF5 446 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 TRIM33Q9UPN9 1127 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 KPNA3O00505 521 aaPredicted RBP17.55■□□□□ 0.4
BEST1-203ENST00000524877 TBL1XO60907 577 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 APODP05090 189 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 SERPINF2P08697 491 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 FGFR1P11362 822 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 NOS2P35228 1153 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 MRPS15P82914 257 aaKnown RBP17.55■□□□□ 0.4
BEST1-203ENST00000524877 MCL1Q07820 350 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 CNGA2Q16280 664 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 HYIQ5T013 277 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 ANLNQ9NQW6 1124 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 TMEM161AQ9NX61 479 aa17.55■□□□□ 0.4
BEST1-203ENST00000524877 DRG1Q9Y295 367 aaKnown RBP17.55■□□□□ 0.4
BEST1-203ENST00000524877 FGF10O15520 208 aaPredicted RBP17.54■□□□□ 0.4
BEST1-203ENST00000524877 SPOCD1Q6ZMY3 1216 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 TC2NQ8N9U0 490 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 ADAM32Q8TC27 787 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 PCDHGB4Q9UN71 923 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 PLAGL2Q9UPG8 496 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 SMIM28A0A1B0GU29 152 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 MSH3P20585 1137 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 GJA9P57773 515 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 DDR2Q16832 855 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 RARS2Q5T160 578 aaKnown RBP17.54■□□□□ 0.4
BEST1-203ENST00000524877 CXorf40AQ8TE69 158 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 PXYLP1Q8TE99 480 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 A0A087X0B3 334 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 ARL5CA6NH57 179 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 ST3GAL1Q11201 340 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 TRADDQ15628 312 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 FSCBQ5H9T9 825 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 ZDHHC6Q9H6R6 413 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 COG4Q9H9E3 785 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 CCDC195A0A1B0GUA6 201 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 E5RJQ4 531 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 IFRD1O00458 451 aaPredicted RBP17.54■□□□□ 0.4
BEST1-203ENST00000524877 NUMBP49757 651 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 MBTD1Q05BQ5 628 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 RRP1BQ14684 758 aaKnown RBP17.54■□□□□ 0.4
BEST1-203ENST00000524877 INAQ16352 499 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 SERPINA13PQ6UXR4 307 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 METTL3Q86U44 580 aaKnown RBP17.54■□□□□ 0.4
BEST1-203ENST00000524877 ANKRD52Q8NB46 1076 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 RUBCNQ92622 972 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 OSGEPL1Q9H4B0 414 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 TXLNGQ9NUQ3 528 aa17.54■□□□□ 0.4
BEST1-203ENST00000524877 PTPN2P17706 415 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 PMS1P54277 932 aaKnown RBP17.53■□□□□ 0.4
BEST1-203ENST00000524877 COQ7Q99807 217 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 TRIM15Q9C019 465 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 TBC1D14Q9P2M4 693 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 OCA2Q04671 838 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 KCNA1Q09470 495 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 FUT2Q10981 343 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 RD3Q7Z3Z2 195 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 ELMO3Q96BJ8 720 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 ZNF669Q96BR6 464 aaPredicted RBP17.53■□□□□ 0.4
BEST1-203ENST00000524877 RBM15Q96T37 977 aaKnown RBP eCLIP17.53■□□□□ 0.4
BEST1-203ENST00000524877 TUBGCP4Q9UGJ1 667 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 VANGL2Q9ULK5 521 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 JCHAINP01591 159 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 PDCLQ13371 301 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 LDLRAD1Q5T700 205 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 GDF6Q6KF10 455 aaPredicted RBP17.53■□□□□ 0.4
BEST1-203ENST00000524877 SLC9A9Q8IVB4 645 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 STAMBPL1Q96FJ0 436 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 CELF6Q96J87 481 aaKnown RBP17.53■□□□□ 0.4
BEST1-203ENST00000524877 CLPBQ9H078 707 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 PRDM16Q9HAZ2 1276 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 RAD18Q9NS91 495 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 RBM22Q9NW64 420 aaKnown RBP eCLIP17.53■□□□□ 0.4
BEST1-203ENST00000524877 PKD2L2Q9NZM6 624 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 ASTN1O14525 1302 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 MEI4A8MW99 385 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.53■□□□□ 0.4
BEST1-203ENST00000524877 GYS2P54840 703 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 ACAP1Q15027 740 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 PHKG1Q16816 387 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 TRIML2Q8N7C3 387 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 MAB21L3Q8N8X9 362 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 WNT8BQ93098 351 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms