RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 SNX15Q9NRS6 342 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 PTGFRNQ9P2B2 879 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 ZNF69Q9UC07 566 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 TLK1Q9UKI8 766 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 PCDHB7Q9Y5E2 793 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 PCDHB2Q9Y5E7 798 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 ENTPD2Q9Y5L3 495 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 TNFRSF18Q9Y5U5 241 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 ZNF213O14771 459 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 CTIFO43310 598 aaKnown RBP5.64□□□□□ -1.51
SKP1-211ENST00000523359 HNRNPCP07910 306 aaKnown RBP eCLIP5.64□□□□□ -1.51
SKP1-211ENST00000523359 ALADP13716 330 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 POLE2P56282 527 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 TXNL4AP83876 142 aaKnown RBP5.64□□□□□ -1.51
SKP1-211ENST00000523359 SEMA3BQ13214 749 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 DNASE1L3Q13609 305 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 TAF5Q15542 800 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 CCDC142Q17RM4 750 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 AKNAD1Q5T1N1 836 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 ATPAF1Q5TC12 328 aaPredicted RBP5.64□□□□□ -1.51
SKP1-211ENST00000523359 SLC29A4Q7RTT9 530 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 KRT27Q7Z3Y8 459 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 ZNF804AQ7Z570 1209 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 SLC44A2Q8IWA5 706 aaPredicted RBP5.64□□□□□ -1.51
SKP1-211ENST00000523359 SFTPA1Q8IWL2 248 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 PNPLA1Q8N8W4 532 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 TBC1D5Q92609 795 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 TRIM63Q969Q1 353 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 MMS19Q96T76 1030 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 ISCA1Q9BUE6 129 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 DUSP26Q9BV47 211 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 SYNPO2LQ9H987 977 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 USP29Q9HBJ7 922 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 CPNE5Q9HCH3 593 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 VPS45Q9NRW7 570 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 ASB6Q9NWX5 421 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 LUZP4Q9P127 313 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 SLC17A6Q9P2U8 582 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 SRP68Q9UHB9 627 aaKnown RBP5.64□□□□□ -1.51
SKP1-211ENST00000523359 ADAM21Q9UKJ8 722 aa5.64□□□□□ -1.51
SKP1-211ENST00000523359 COL11A2P13942 1736 aaPredicted RBP5.64□□□□□ -1.51
SKP1-211ENST00000523359 FAM90A18PA6NE21 464 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 FAM90A16PA6NEW6 464 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 FAM90A9PA6NNJ1 464 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 FAM90A5PA8MXJ8 464 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 KIF28PB7ZC32 967 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 M0QZQ0 153 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 EXOC3O60645 756 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 PPP6R2O75170 966 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 PTMAP06454 111 aaKnown RBP5.63□□□□□ -1.51
SKP1-211ENST00000523359 FAM90A15PP0C7V4 464 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 FAM90A14PP0C7W9 464 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 DHRS4L1P0CG22 281 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 ZNF37AP17032 561 aaPredicted RBP5.63□□□□□ -1.51
SKP1-211ENST00000523359 CALRP27797 417 aaKnown RBP5.63□□□□□ -1.51
SKP1-211ENST00000523359 PPM1FP49593 454 aaPredicted RBP5.63□□□□□ -1.51
SKP1-211ENST00000523359 CACNA2D1P54289 1103 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 CEP85Q6P2H3 762 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 AMIGO2Q86SJ2 522 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 TRABD2AQ86V40 505 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 PRIMA1Q86XR5 153 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 SUGP1Q8IWZ8 645 aaKnown RBP5.63□□□□□ -1.51
SKP1-211ENST00000523359 OVCA2Q8WZ82 227 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 RUBCNQ92622 972 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 RSC1A1Q92681 617 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 ZNF764Q96H86 408 aaPredicted RBP5.63□□□□□ -1.51
SKP1-211ENST00000523359 UROC1Q96N76 676 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 BBC3Q96PG8 261 aaPredicted RBP5.63□□□□□ -1.51
SKP1-211ENST00000523359 PAAF1Q9BRP4 392 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 CIPCQ9C0C6 399 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 KLK15Q9H2R5 256 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 PRDM8Q9NQV8 689 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 ITM2CQ9NQX7 267 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 VPS4AQ9UN37 437 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 GPR52Q9Y2T5 361 aa5.63□□□□□ -1.51
SKP1-211ENST00000523359 HMX3A6NHT5 357 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 PRAMEF2O60811 474 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 FBLP22087 321 aaKnown RBP5.62□□□□□ -1.51
SKP1-211ENST00000523359 PTH2RP49190 550 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 RENBPP51606 427 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 COPB1P53618 953 aaKnown RBP5.62□□□□□ -1.51
SKP1-211ENST00000523359 MRPS21P82921 87 aaKnown RBP5.62□□□□□ -1.51
SKP1-211ENST00000523359 CCDC15Q0P6D6 951 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 RAPGEF1Q13905 1077 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 TRIM60Q495X7 471 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 ZNF362Q5T0B9 420 aaPredicted RBP5.62□□□□□ -1.51
SKP1-211ENST00000523359 STRIP1Q5VSL9 837 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 RRAGAQ7L523 313 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 ADGRG3Q86Y34 549 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 C12orf76Q8N812 135 aaPredicted RBP5.62□□□□□ -1.51
SKP1-211ENST00000523359 FAM71DQ8N9W8 422 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 TERB1Q8NA31 727 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 NTN5Q8WTR8 489 aaPredicted RBP5.62□□□□□ -1.51
SKP1-211ENST00000523359 TIMP4Q99727 224 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 FAM167BQ9BTA0 163 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 CINPQ9BW66 212 aaPredicted RBP5.62□□□□□ -1.51
SKP1-211ENST00000523359 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.62□□□□□ -1.51
SKP1-211ENST00000523359 BRD8Q9H0E9 1235 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 VPS16Q9H269 839 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 ELAC1Q9H777 363 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms