RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 EDEM1Q92611 657 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 TOE1Q96GM8 510 aaKnown RBP16.17■□□□□ 0.18
MRPS28-209ENST00000522987 TMEM121BQ9BXQ6 578 aaPredicted RBP16.17■□□□□ 0.18
MRPS28-209ENST00000522987 MKRN2Q9H000 416 aaKnown RBP16.17■□□□□ 0.18
MRPS28-209ENST00000522987 PRDM16Q9HAZ2 1276 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 RAB20Q9NX57 234 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 CLIC5Q9NZA1 410 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 PTPRBP23467 1997 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 MUC22E2RYF6 1773 aaPredicted RBP16.16■□□□□ 0.18
MRPS28-209ENST00000522987 PLXNB3Q9ULL4 1909 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 KCNJ18B7U540 433 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 PIK3R2O00459 728 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 PENKP01210 267 aaPredicted RBP16.16■□□□□ 0.18
MRPS28-209ENST00000522987 EPB41P11171 864 aaKnown RBP16.16■□□□□ 0.18
MRPS28-209ENST00000522987 HLA-EP13747 358 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 CD19P15391 556 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 PRKCHP24723 683 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 DPP6P42658 865 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 PSEN1P49768 467 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 COG7P83436 770 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 PDE4CQ08493 712 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 ZNF234Q14588 700 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 STARD3Q14849 445 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 CBWD6Q4V339 395 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 CBWD3Q5JTY5 395 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 CBWD5Q5RIA9 395 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 ZCCHC9Q8N567 271 aaKnown RBP16.16■□□□□ 0.18
MRPS28-209ENST00000522987 UBA3Q8TBC4 463 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 GATA6Q92908 595 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 DNAI2Q9GZS0 605 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 SFMBT1Q9UHJ3 866 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 FBXO10Q9UK96 956 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 STRIP2Q9ULQ0 834 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 KNL1Q8NG31 2342 aa16.16■□□□□ 0.18
MRPS28-209ENST00000522987 FAM237AA0A1B0GTK4 181 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 SH3BP5O60239 455 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 SYNCRIPO60506 623 aaKnown RBP16.15■□□□□ 0.18
MRPS28-209ENST00000522987 CALCAP01258 141 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 EPHX1P07099 455 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 NCAM1P13591 858 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 CD59P13987 128 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 CD6P30203 668 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 HOXD12P35452 270 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 CHKAP35790 457 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 ADIGQ0VDE8 80 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 TMEM215Q68D42 235 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 ANKS1BQ7Z6G8 1248 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 UCMAQ8WVF2 138 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 ZCCHC14Q8WYQ9 949 aaKnown RBP16.15■□□□□ 0.18
MRPS28-209ENST00000522987 ZNF419Q96HQ0 510 aaPredicted RBP16.15■□□□□ 0.18
MRPS28-209ENST00000522987 DCLK3Q9C098 648 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 THAP10Q9P2Z0 257 aaPredicted RBP16.15■□□□□ 0.18
MRPS28-209ENST00000522987 TSPAN16Q9UKR8 245 aa16.15■□□□□ 0.18
MRPS28-209ENST00000522987 PLXNA2O75051 1894 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 NYNRINQ9P2P1 1898 aaKnown RBP16.14■□□□□ 0.17
MRPS28-209ENST00000522987 A0A1W2PQD8 194 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 TRIM49BA6NDI0 452 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 GFRA2O00451 464 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 CETN3O15182 167 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 MSI1O43347 362 aaKnown RBP16.14■□□□□ 0.17
MRPS28-209ENST00000522987 ZBED1O96006 694 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 CYBBP04839 570 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 SYPP08247 313 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 GTF2H1P32780 548 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 PRCPP42785 496 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 PMS1P54277 932 aaKnown RBP16.14■□□□□ 0.17
MRPS28-209ENST00000522987 ARID5AQ03989 594 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 GRIK2Q13002 908 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 RAB41Q5JT25 222 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 SYCP2LQ5T4T6 812 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 ARHGAP17Q68EM7 881 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 ISM2Q6H9L7 571 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 BHLHA9Q7RTU4 235 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 TMPRSS6Q8IU80 811 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 FMNL3Q8IVF7 1028 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 PNPLA1Q8N8W4 532 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 ANKRD52Q8NB46 1076 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 CYB5D2Q8WUJ1 264 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 SNX19Q92543 992 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 SIPA1Q96FS4 1042 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 PIWIL1Q96J94 861 aaKnown RBP16.14■□□□□ 0.17
MRPS28-209ENST00000522987 CDK5RAP1Q96SZ6 601 aaKnown RBP16.14■□□□□ 0.17
MRPS28-209ENST00000522987 IL21RQ9HBE5 538 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 LRRC4Q9HBW1 653 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 ELOVL2Q9NXB9 296 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 WSB2Q9NYS7 404 aaPredicted RBP16.14■□□□□ 0.17
MRPS28-209ENST00000522987 ZNF510Q9Y2H8 683 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 SLC27A6Q9Y2P4 619 aa16.14■□□□□ 0.17
MRPS28-209ENST00000522987 CACNA1GO43497 2377 aa16.13■□□□□ 0.17
MRPS28-209ENST00000522987 LCP1P13796 627 aa16.13■□□□□ 0.17
MRPS28-209ENST00000522987 RGS7P49802 495 aa16.13■□□□□ 0.17
MRPS28-209ENST00000522987 TPMTP51580 245 aa16.13■□□□□ 0.17
MRPS28-209ENST00000522987 SGSHP51688 502 aa16.13■□□□□ 0.17
MRPS28-209ENST00000522987 EDRF1Q3B7T1 1238 aa16.13■□□□□ 0.17
MRPS28-209ENST00000522987 DCAF12L1Q5VU92 463 aa16.13■□□□□ 0.17
MRPS28-209ENST00000522987 SERPINA13PQ6UXR4 307 aa16.13■□□□□ 0.17
MRPS28-209ENST00000522987 RABEPKQ7Z6M1 372 aa16.13■□□□□ 0.17
MRPS28-209ENST00000522987 ARHGAP18Q8N392 663 aa16.13■□□□□ 0.17
MRPS28-209ENST00000522987 IPO9Q96P70 1041 aaKnown RBP16.13■□□□□ 0.17
MRPS28-209ENST00000522987 USP36Q9P275 1121 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms