RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SYT2Q8N9I0 419 aaPredicted RBP6.67□□□□□ -1.34
PABPC1-220ENST00000522658 FBXO18Q8NFZ0 1043 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 OR10T2Q8NGX3 314 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 SPATA18Q8TC71 538 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 CACTINQ8WUQ7 758 aaKnown RBP6.67□□□□□ -1.34
PABPC1-220ENST00000522658 POMGNT1Q8WZA1 660 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 FAM168AQ92567 244 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 USP13Q92995 863 aaPredicted RBP6.67□□□□□ -1.34
PABPC1-220ENST00000522658 ISL2Q96A47 359 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 CHFRQ96EP1 664 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 HRASLS5Q96KN8 279 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 CNOT6LQ96LI5 555 aaKnown RBP6.67□□□□□ -1.34
PABPC1-220ENST00000522658 ZSCAN31Q96LW9 406 aaPredicted RBP6.67□□□□□ -1.34
PABPC1-220ENST00000522658 DMRTB1Q96MA1 342 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 GTPBP2Q9BX10 602 aaKnown RBP6.67□□□□□ -1.34
PABPC1-220ENST00000522658 SLC46A2Q9BY10 475 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 RBCK1Q9BYM8 510 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 KRTAP4-9Q9BYQ8 210 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 ASB7Q9H672 318 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 DDX43Q9NXZ2 648 aaKnown RBP6.67□□□□□ -1.34
PABPC1-220ENST00000522658 DPP3Q9NY33 737 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 EBF1Q9UH73 591 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 AGO2Q9UKV8 859 aaKnown RBP6.67□□□□□ -1.34
PABPC1-220ENST00000522658 TBX20Q9UMR3 447 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 EXOC7Q9UPT5 735 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 CCL26Q9Y258 94 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 WNT6Q9Y6F9 365 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 WDR87Q6ZQQ6 2873 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 TRIP11Q15643 1979 aa6.67□□□□□ -1.34
PABPC1-220ENST00000522658 KMT2BQ9UMN6 2715 aaPredicted RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 MAP1BP46821 2468 aaKnown RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 KPNA7A9QM74 516 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 SLC9A3R1O14745 358 aaPredicted RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 PPEF2O14830 753 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 GIPC1O14908 333 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 OPHN1O60890 802 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 RNGTTO60942 597 aaKnown RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 VNN2O95498 520 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 SIM1P81133 766 aaPredicted RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 GFPT1Q06210 699 aaPredicted RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 MYO1EQ12965 1108 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 POSTNQ15063 836 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 MAPRE1Q15691 268 aaKnown RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 ZNF77Q15935 545 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 ZNF124Q15973 351 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 HSF5Q4G112 596 aaPredicted RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 RILPL1Q5EBL4 403 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 SDHAF4Q5VUM1 108 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 WSCD1Q658N2 575 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 MON1AQ86VX9 555 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 DDX42Q86XP3 938 aaKnown RBP eCLIP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 NT5DC4Q86YG4 428 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 SYT12Q8IV01 421 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 EFCAB13Q8IY85 973 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 ADGRF2Q8IZF7 708 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 SYCP3Q8IZU3 236 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 RNF214Q8ND24 703 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 CEP76Q8TAP6 659 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 SH3RF2Q8TEC5 729 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 LEO1Q8WVC0 666 aaPredicted RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 HMGB4Q8WW32 186 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 ANKRD36BP1Q96IX9 119 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 HEXIM2Q96MH2 286 aaKnown RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 LRRC3BQ96PB8 259 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 REEP2Q9BRK0 252 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 NTPCRQ9BSD7 190 aaKnown RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 TRPM5Q9NZQ8 1165 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 EVLQ9UI08 416 aaPredicted RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 MMP17Q9ULZ9 603 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 NEUROG3Q9Y4Z2 214 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 PCDHB6Q9Y5E3 794 aa6.66□□□□□ -1.34
PABPC1-220ENST00000522658 ATXN2Q99700 1313 aaKnown RBP6.66□□□□□ -1.34
PABPC1-220ENST00000522658 TSC2P49815 1807 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 KIF26AQ9ULI4 1882 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 A0A0B4J269 797 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 NPHP3-ACAD11A0A0J9YXS1 232 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 TCRBV21S2A2A0A5A6 115 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 DBX1A6NMT0 343 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 SRRM3A6NNA2 597 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 PATE3B3GLJ2 98 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 SLC26A4O43511 780 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 KLF8O95600 359 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 BMP15O95972 392 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 LDHAP00338 332 aaKnown RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 PIGRP01833 764 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 SYPP08247 313 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 HDCP19113 662 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 POLR2BP30876 1174 aaKnown RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 HOXD12P35452 270 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 LHX1P48742 406 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 ACOT2P49753 483 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 SLC12A3P55017 1021 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 MRPS21P82921 87 aaKnown RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 RPL6Q02878 288 aaKnown RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 KDSRQ06136 332 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 HNRNPDQ14103 355 aaKnown RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 SDE2Q6IQ49 451 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 SLC36A4Q6YBV0 504 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 KCNK18Q7Z418 384 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms