RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 LIMK1P53667 647 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 MFAP3P55082 362 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 DAOAP59103 153 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 CNGA2Q16280 664 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 LPCAT2Q7L5N7 544 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 IPO4Q8TEX9 1081 aaKnown RBP21.65■■□□□ 1.06
SDCBP-209ENST00000522243 SLC35F5Q8WV83 523 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 PIGKQ92643 395 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 CNGB3Q9NQW8 809 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 OLA1Q9NTK5 396 aaKnown RBP21.65■■□□□ 1.06
SDCBP-209ENST00000522243 CLEC4EQ9ULY5 219 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 MARSP56192 900 aaKnown RBP21.64■■□□□ 1.05
SDCBP-209ENST00000522243 TRIP4Q15650 581 aaPredicted RBP21.64■■□□□ 1.05
SDCBP-209ENST00000522243 GEN1Q17RS7 908 aa21.64■■□□□ 1.05
SDCBP-209ENST00000522243 RNF43Q68DV7 783 aa21.64■■□□□ 1.05
SDCBP-209ENST00000522243 CPXM2Q8N436 756 aa21.64■■□□□ 1.05
SDCBP-209ENST00000522243 DEFB119Q8N690 84 aa21.64■■□□□ 1.05
SDCBP-209ENST00000522243 DDI1Q8WTU0 396 aa21.64■■□□□ 1.05
SDCBP-209ENST00000522243 KREMEN1Q96MU8 473 aa21.64■■□□□ 1.05
SDCBP-209ENST00000522243 EDEM2Q9BV94 578 aa21.64■■□□□ 1.05
SDCBP-209ENST00000522243 INTS2Q9H0H0 1204 aaKnown RBP21.64■■□□□ 1.05
SDCBP-209ENST00000522243 SLC6A17Q9H1V8 727 aa21.64■■□□□ 1.05
SDCBP-209ENST00000522243 ABCC13Q9NSE7 274 aa21.64■■□□□ 1.05
SDCBP-209ENST00000522243 CALCOCO1Q9P1Z2 691 aa21.64■■□□□ 1.05
SDCBP-209ENST00000522243 TNRC6BQ9UPQ9 1833 aaKnown RBP21.64■■□□□ 1.05
SDCBP-209ENST00000522243 MSI1O43347 362 aaKnown RBP21.63■■□□□ 1.05
SDCBP-209ENST00000522243 TSPAN3O60637 253 aa21.63■■□□□ 1.05
SDCBP-209ENST00000522243 CYBBP04839 570 aa21.63■■□□□ 1.05
SDCBP-209ENST00000522243 PTGER3P43115 390 aa21.63■■□□□ 1.05
SDCBP-209ENST00000522243 UBE2HP62256 183 aa21.63■■□□□ 1.05
SDCBP-209ENST00000522243 BYSLQ13895 437 aaKnown RBP21.63■■□□□ 1.05
SDCBP-209ENST00000522243 TRIML1Q8N9V2 468 aa21.63■■□□□ 1.05
SDCBP-209ENST00000522243 CLEC4CQ8WTT0 213 aa21.63■■□□□ 1.05
SDCBP-209ENST00000522243 GABRG3Q99928 467 aa21.63■■□□□ 1.05
SDCBP-209ENST00000522243 KIAA1468Q9P260 1216 aa21.63■■□□□ 1.05
SDCBP-209ENST00000522243 SLC27A6Q9Y2P4 619 aa21.63■■□□□ 1.05
SDCBP-209ENST00000522243 HBS1LQ9Y450 684 aaKnown RBP21.63■■□□□ 1.05
SDCBP-209ENST00000522243 ZBTB24O43167 697 aaPredicted RBP21.62■■□□□ 1.05
SDCBP-209ENST00000522243 NDUFV2P19404 249 aa21.62■■□□□ 1.05
SDCBP-209ENST00000522243 HARS2P49590 506 aaKnown RBP21.62■■□□□ 1.05
SDCBP-209ENST00000522243 GCNT1Q02742 428 aa21.62■■□□□ 1.05
SDCBP-209ENST00000522243 SCML4Q8N228 414 aa21.62■■□□□ 1.05
SDCBP-209ENST00000522243 MIS12Q9H081 205 aa21.62■■□□□ 1.05
SDCBP-209ENST00000522243 CD248Q9HCU0 757 aa21.62■■□□□ 1.05
SDCBP-209ENST00000522243 STON1Q9Y6Q2 735 aa21.62■■□□□ 1.05
SDCBP-209ENST00000522243 ATXN2Q99700 1313 aaKnown RBP21.61■■□□□ 1.05
SDCBP-209ENST00000522243 CACNA1AO00555 2505 aa21.61■■□□□ 1.05
SDCBP-209ENST00000522243 DNAH14Q0VDD8 3507 aa21.61■■□□□ 1.05
SDCBP-209ENST00000522243 TM4SF5O14894 197 aa21.61■■□□□ 1.05
SDCBP-209ENST00000522243 KHNYNO15037 678 aaKnown RBP21.61■■□□□ 1.05
SDCBP-209ENST00000522243 FGFR1OPO95684 399 aaKnown RBP21.61■■□□□ 1.05
SDCBP-209ENST00000522243 KRT5P13647 590 aa21.61■■□□□ 1.05
SDCBP-209ENST00000522243 ZNF132P52740 706 aa21.61■■□□□ 1.05
SDCBP-209ENST00000522243 STILQ15468 1287 aa21.61■■□□□ 1.05
SDCBP-209ENST00000522243 FAM217AQ8IXS0 508 aa21.61■■□□□ 1.05
SDCBP-209ENST00000522243 PIWIL1Q96J94 861 aaKnown RBP21.61■■□□□ 1.05
SDCBP-209ENST00000522243 CRACR2AQ9BSW2 395 aa21.61■■□□□ 1.05
SDCBP-209ENST00000522243 UBE2TQ9NPD8 197 aaPredicted RBP21.61■■□□□ 1.05
SDCBP-209ENST00000522243 CD93Q9NPY3 652 aa21.61■■□□□ 1.05
SDCBP-209ENST00000522243 TMEM74BQ9NUR3 256 aa21.61■■□□□ 1.05
SDCBP-209ENST00000522243 CYP8B1Q9UNU6 501 aa21.61■■□□□ 1.05
SDCBP-209ENST00000522243 LNP1A1A4G5 178 aa21.6■■□□□ 1.05
SDCBP-209ENST00000522243 C4orf47A7E2U8 309 aa21.6■■□□□ 1.05
SDCBP-209ENST00000522243 IL12RB1P42701 662 aa21.6■■□□□ 1.05
SDCBP-209ENST00000522243 IRX4P78413 519 aa21.6■■□□□ 1.05
SDCBP-209ENST00000522243 RPL6Q02878 288 aaKnown RBP21.6■■□□□ 1.05
SDCBP-209ENST00000522243 MPPE1Q53F39 396 aa21.6■■□□□ 1.05
SDCBP-209ENST00000522243 GJB7Q6PEY0 223 aa21.6■■□□□ 1.05
SDCBP-209ENST00000522243 HSFY1Q96LI6 401 aa21.6■■□□□ 1.05
SDCBP-209ENST00000522243 MED15Q96RN5 788 aa21.6■■□□□ 1.05
SDCBP-209ENST00000522243 CHMP5Q9NZZ3 219 aa21.6■■□□□ 1.05
SDCBP-209ENST00000522243 RWDD2AQ9UIY3 292 aa21.6■■□□□ 1.05
SDCBP-209ENST00000522243 IGHV1OR15-9A0A0B4J2B8 117 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 GFRA2O00451 464 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 LTFP02788 710 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 ADRB1P08588 477 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 LYSMD4Q5XG99 296 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 MSANTD2Q6P1R3 559 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 DENND1BQ6P3S1 775 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 KIAA1324Q6UXG2 1013 aaKnown RBP21.59■■□□□ 1.05
SDCBP-209ENST00000522243 ANKS1BQ7Z6G8 1248 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 UCMAQ8WVF2 138 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 SORCS1Q8WY21 1168 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 IRGQQ8WZA9 623 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 DDX1Q92499 740 aaKnown RBP21.59■■□□□ 1.05
SDCBP-209ENST00000522243 MRGPRX1Q96LB2 322 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 CIPCQ9C0C6 399 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 ST7Q9NRC1 585 aa21.59■■□□□ 1.05
SDCBP-209ENST00000522243 THAP10Q9P2Z0 257 aaPredicted RBP21.59■■□□□ 1.05
SDCBP-209ENST00000522243 ITPKAP23677 461 aa21.58■■□□□ 1.05
SDCBP-209ENST00000522243 HOXD9P28356 352 aaPredicted RBP21.58■■□□□ 1.05
SDCBP-209ENST00000522243 GPD2P43304 727 aa21.58■■□□□ 1.05
SDCBP-209ENST00000522243 APBA1Q02410 837 aa21.58■■□□□ 1.05
SDCBP-209ENST00000522243 TRIM61Q5EBN2 209 aa21.58■■□□□ 1.05
SDCBP-209ENST00000522243 TMEM215Q68D42 235 aa21.58■■□□□ 1.05
SDCBP-209ENST00000522243 SLC36A4Q6YBV0 504 aa21.58■■□□□ 1.05
SDCBP-209ENST00000522243 SCUBE3Q8IX30 993 aa21.58■■□□□ 1.05
SDCBP-209ENST00000522243 GOLGA1Q92805 767 aa21.58■■□□□ 1.05
SDCBP-209ENST00000522243 TMA16Q96EY4 203 aaKnown RBP21.58■■□□□ 1.05
SDCBP-209ENST00000522243 ACP6Q9NPH0 428 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms