RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 FAM26DQ5JW98 314 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 FBXO47Q5MNV8 452 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 DMRTA1Q5VZB9 504 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 TAF2Q6P1X5 1199 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 ADGRD1Q6QNK2 874 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 ABHD15Q6UXT9 468 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 BZW1Q7L1Q6 419 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 LONP2Q86WA8 852 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 RNF135Q8IUD6 432 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 C4orf33Q8N1A6 199 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 UBR7Q8N806 425 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 PPFIBP2Q8ND30 876 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 RAB3IL1Q8TBN0 382 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 MICAL1Q8TDZ2 1067 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 ZNF606Q8WXB4 792 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 ZNF516Q92618 1163 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 MCUR1Q96AQ8 359 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 THOC1Q96FV9 657 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 ANKRD36BP1Q96IX9 119 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 NUDCD1Q96RS6 583 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 PPP1R16BQ96T49 567 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 PHOX2BQ99453 314 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 PAFAH2Q99487 392 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 HERPUD2Q9BSE4 406 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 VCXQ9H320 206 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 SYNCQ9H7C4 482 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 TLE6Q9H808 572 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 DCLRE1BQ9H816 532 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 AGO3Q9H9G7 860 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 GGT7Q9UJ14 662 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 LRFN2Q9ULH4 789 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 CORO1CQ9ULV4 474 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 BARX2Q9UMQ3 279 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 CHKBQ9Y259 395 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 RWDD3Q9Y3V2 267 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 KIAA1671Q9BY89 1806 aa8.96□□□□□ -0.98
CTNNA1-223ENST00000520520 MYO7AQ13402 2215 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 A8MXQ7 604 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 C5orf67F2Z3F1 127 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 APOC4-APOC2K7ER74 178 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 PER2O15055 1255 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 OGTO15294 1046 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 DNAJC6O75061 913 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 TOM1L1O75674 476 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 ZNF189O75820 626 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 RNF8O76064 485 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 STBD1O95210 358 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 IL18RAPO95256 599 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 APOC2P02655 101 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 RB1P06400 928 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 SKIP12755 728 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 KRT10P13645 584 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 INSRRP14616 1297 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 KRT4P19013 534 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 ATP6V1C1P21283 382 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 DNAJB1P25685 340 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 TARSP26639 723 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 GCAP28676 217 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 RPA3P35244 121 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 ARL2P36404 184 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 ACOT2P49753 483 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 ARFIP2P53365 341 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 RAD23BP54727 409 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 ADAM17P78536 824 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 ROR1Q01973 937 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 MGAT3Q09327 533 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 SMAD4Q13485 552 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 BLMHQ13867 455 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 TFDP1Q14186 410 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 KRT72Q14CN4 511 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 LLGL1Q15334 1064 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 SMAD2Q15796 467 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 CCDC142Q17RM4 750 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 MUM1Q2TAK8 710 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 ACCSLQ4AC99 568 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 FAM91A1Q658Y4 838 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 ATG16L1Q676U5 607 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 CAPRIN2Q6IMN6 1127 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 SPOPLQ6IQ16 392 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 TSHZ1Q6ZSZ6 1077 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 TAS1R3Q7RTX0 852 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 TRMT1LQ7Z2T5 733 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 APBB1IPQ7Z5R6 666 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 RFX6Q8HWS3 928 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 CCDC60Q8IWA6 550 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 KLHL23Q8NBE8 558 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 POF1BQ8WVV4 589 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 LINC01599Q8WXQ3 324 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 SEPT1Q8WYJ6 367 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 ZNF75CPQ92670 426 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 HAUS1Q96CS2 278 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 MTBPQ96DY7 904 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 NAF1Q96HR8 494 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 KCNK17Q96T54 332 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 SH2D3AQ9BRG2 576 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 SIKE1Q9BRV8 207 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 DHRS4Q9BTZ2 278 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 APOL5Q9BWW9 433 aa8.95□□□□□ -0.98
CTNNA1-223ENST00000520520 TSSK1BQ9BXA7 367 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms