RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 TRIM24O15164 1050 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 MAP3K13O43283 966 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 FGFR1OPO95684 399 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 HOXB2P14652 356 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 CHKAP35790 457 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 DPP6P42658 865 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 DHPSP49366 369 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 DGKGP49619 791 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 PMS1P54277 932 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 MAP7D1Q3KQU3 841 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 PM20D1Q6GTS8 502 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 TCEAL6Q6IPX3 200 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 LPCAT2Q7L5N7 544 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 TMC6Q7Z403 805 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 MIB1Q86YT6 1006 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 PGBD3Q8N328 593 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 HMGB4Q8WW32 186 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 TCEAL3Q969E4 200 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 SLC35C1Q96A29 364 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 EDEM2Q9BV94 578 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 LSM14BQ9BX40 385 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 KCNF1Q9H3M0 494 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 LIMA1Q9UHB6 759 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 RASAL2Q9UJF2 1139 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 FBXO10Q9UK96 956 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 HCN2Q9UL51 889 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 LAMA1P25391 3075 aa13.05□□□□□ -0.32
TRAPPC9-206ENST00000519482 EPG5Q9HCE0 2579 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 A0A1B0GTH6 734 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 GFRA2O00451 464 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 XPO1O14980 1071 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 PMM2O15305 246 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 CCP110O43303 1012 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 ZBED1O96006 694 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 CISD3P0C7P0 127 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 SKILP12757 684 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 CD44P16070 742 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 TBXAS1P24557 533 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 TKTL1P51854 596 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 BCAT1P54687 386 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 YWHAGP61981 247 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 EFEMP1Q12805 493 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 SGO2Q562F6 1265 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 EGFLAMQ63HQ2 1017 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 CHPFQ8IZ52 775 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 NELFBQ8WX92 580 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 RLN3Q8WXF3 142 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 CEP63Q96MT8 703 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 MED15Q96RN5 788 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 GABRG3Q99928 467 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 THAP9Q9H5L6 903 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 OLA1Q9NTK5 396 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 HESX1Q9UBX0 185 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 EVLQ9UI08 416 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 TSPAN16Q9UKR8 245 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 KIAA1257Q9ULG3 409 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 STRIP2Q9ULQ0 834 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 SLC27A6Q9Y2P4 619 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 CHD8Q9HCK8 2581 aa13.04□□□□□ -0.32
TRAPPC9-206ENST00000519482 A0A1W2PQF6 199 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 LNP1A1A4G5 178 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 TRIM49BA6NDI0 452 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 PRRT4C9JH25 899 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 ZBTB24O43167 697 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 PENKP01210 267 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 KLKB1P03952 638 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 VDRP11473 427 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 GABRG2P18507 467 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 CORO1AP31146 461 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 PDE4CQ08493 712 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 BST2Q10589 180 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 GOLGA7BQ2TAP0 167 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 DAB2IPQ5VWQ8 1189 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 SPECC1LQ69YQ0 1117 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 KLHL10Q6JEL2 608 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 SLC36A4Q6YBV0 504 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 TOGARAM2Q6ZUX3 1019 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 RSRC2Q7L4I2 434 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 FAM114A1Q8IWE2 563 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 CPXM2Q8N436 756 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 UBR7Q8N806 425 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 PIGKQ92643 395 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 NAP1L5Q96NT1 182 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 LRRC4Q9HBW1 653 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 CD248Q9HCU0 757 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 SAMSN1Q9NSI8 373 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 MARCH2Q9P0N8 246 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 MBD1Q9UIS9 605 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 GON4LQ3T8J9 2241 aa13.03□□□□□ -0.32
TRAPPC9-206ENST00000519482 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.02□□□□□ -0.33
TRAPPC9-206ENST00000519482 C4orf47A7E2U8 309 aa13.02□□□□□ -0.33
TRAPPC9-206ENST00000519482 NPC1O15118 1278 aa13.02□□□□□ -0.33
TRAPPC9-206ENST00000519482 ZNF217O75362 1048 aa13.02□□□□□ -0.33
TRAPPC9-206ENST00000519482 KCNK5O95279 499 aa13.02□□□□□ -0.33
TRAPPC9-206ENST00000519482 SETSIPP0DME0 302 aa13.02□□□□□ -0.33
TRAPPC9-206ENST00000519482 CD19P15391 556 aa13.02□□□□□ -0.33
TRAPPC9-206ENST00000519482 EEF1GP26641 437 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-206ENST00000519482 HOXD12P35452 270 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms