RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 GCAP28676 217 aa27.49■■□□□ 1.99
COL13A1-210ENST00000517713 PHBP35232 272 aa27.49■■□□□ 1.99
COL13A1-210ENST00000517713 ADRA1BP35368 520 aa27.49■■□□□ 1.99
COL13A1-210ENST00000517713 APLP1P51693 650 aa27.49■■□□□ 1.99
COL13A1-210ENST00000517713 PM20D1Q6GTS8 502 aa27.49■■□□□ 1.99
COL13A1-210ENST00000517713 TDRPQ86YL5 185 aa27.49■■□□□ 1.99
COL13A1-210ENST00000517713 CCDC110Q8TBZ0 833 aa27.49■■□□□ 1.99
COL13A1-210ENST00000517713 PGAP3Q96FM1 320 aaPredicted RBP27.49■■□□□ 1.99
COL13A1-210ENST00000517713 WDR83Q9BRX9 315 aaKnown RBP27.49■■□□□ 1.99
COL13A1-210ENST00000517713 KLC2Q9H0B6 622 aa27.49■■□□□ 1.99
COL13A1-210ENST00000517713 WDR6Q9NNW5 1121 aaKnown RBP27.49■■□□□ 1.99
COL13A1-210ENST00000517713 INTS9Q9NV88 658 aaKnown RBP27.49■■□□□ 1.99
COL13A1-210ENST00000517713 PHF24Q9UPV7 400 aa27.49■■□□□ 1.99
COL13A1-210ENST00000517713 CREB3O43889 395 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 DSC1Q08554 894 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 CCDC33Q8N5R6 958 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 ZNF473Q8WTR7 871 aaKnown RBP27.48■■□□□ 1.99
COL13A1-210ENST00000517713 ATXN2LQ8WWM7 1075 aaKnown RBP27.48■■□□□ 1.99
COL13A1-210ENST00000517713 NTAN1Q96AB6 310 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 FOXO6A8MYZ6 492 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 POC1B-GALNT4F8VUJ3 575 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 FKTNO75072 461 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 GCATO75600 419 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 DGKIO75912 1065 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 YWHAHQ04917 246 aaPredicted RBP27.48■■□□□ 1.99
COL13A1-210ENST00000517713 ARHGEF6Q15052 776 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 SYCP2LQ5T4T6 812 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 TADA2BQ86TJ2 420 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 PALM2Q8IXS6 379 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 OLFM3Q96PB7 478 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 FTHL17Q9BXU8 183 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 PPCSQ9HAB8 311 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 FBXW11Q9UKB1 542 aa27.48■■□□□ 1.99
COL13A1-210ENST00000517713 HACD1B0YJ81 288 aa27.47■■□□□ 1.99
COL13A1-210ENST00000517713 KBTBD13C9JR72 458 aa27.47■■□□□ 1.99
COL13A1-210ENST00000517713 CREB1P16220 341 aa27.47■■□□□ 1.99
COL13A1-210ENST00000517713 MTM1Q13496 603 aa27.47■■□□□ 1.99
COL13A1-210ENST00000517713 TMED2Q15363 201 aa27.47■■□□□ 1.99
COL13A1-210ENST00000517713 C3orf62Q6ZUJ4 267 aa27.47■■□□□ 1.99
COL13A1-210ENST00000517713 LRRC8DQ7L1W4 858 aa27.47■■□□□ 1.99
COL13A1-210ENST00000517713 SCML4Q8N228 414 aa27.47■■□□□ 1.99
COL13A1-210ENST00000517713 TFB1MQ8WVM0 346 aaKnown RBP27.47■■□□□ 1.99
COL13A1-210ENST00000517713 MAML1Q92585 1016 aa27.47■■□□□ 1.99
COL13A1-210ENST00000517713 EDEM1Q92611 657 aa27.47■■□□□ 1.99
COL13A1-210ENST00000517713 PNPLA8Q9NP80 782 aa27.47■■□□□ 1.99
COL13A1-210ENST00000517713 DDIT4Q9NX09 232 aa27.47■■□□□ 1.99
COL13A1-210ENST00000517713 EEF2KO00418 725 aaKnown RBP27.46■■□□□ 1.99
COL13A1-210ENST00000517713 TSHRP16473 764 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 SSTR1P30872 391 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 HEATR6Q6AI08 1181 aaKnown RBP27.46■■□□□ 1.99
COL13A1-210ENST00000517713 VSTM1Q6UX27 236 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 COLGALT2Q8IYK4 626 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 FRMD8Q9BZ67 464 aaPredicted RBP27.46■■□□□ 1.99
COL13A1-210ENST00000517713 ETNK1Q9HBU6 452 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 KANSL3Q9P2N6 904 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 RABGEF1Q9UJ41 708 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 C5orf60A6NFR6 353 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 EBAG9O00559 213 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 MFSD11O43934 449 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 F9P00740 461 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 SELPP16109 830 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 MAGEA6P43360 314 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 SCAPQ12770 1279 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 FAXCQ5TGI0 409 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 RFX8Q6ZV50 586 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 SPATA2LQ8IUW3 424 aaPredicted RBP27.46■■□□□ 1.99
COL13A1-210ENST00000517713 FAM107BQ9H098 131 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 TBC1D13Q9NVG8 400 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.46■■□□□ 1.99
COL13A1-210ENST00000517713 SLC24A2Q9UI40 661 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 ACTL7BQ9Y614 415 aa27.46■■□□□ 1.99
COL13A1-210ENST00000517713 SF3B1O75533 1304 aaKnown RBP eCLIP27.45■■□□□ 1.99
COL13A1-210ENST00000517713 TMEM120BA0PK00 339 aa27.45■■□□□ 1.99
COL13A1-210ENST00000517713 BRAFP15056 766 aa27.45■■□□□ 1.99
COL13A1-210ENST00000517713 VEGFBP49765 207 aa27.45■■□□□ 1.99
COL13A1-210ENST00000517713 PRMT2P55345 433 aa27.45■■□□□ 1.99
COL13A1-210ENST00000517713 NR1H3Q13133 447 aa27.45■■□□□ 1.99
COL13A1-210ENST00000517713 CBLBQ13191 982 aa27.45■■□□□ 1.99
COL13A1-210ENST00000517713 DPYSQ14117 519 aa27.45■■□□□ 1.99
COL13A1-210ENST00000517713 BSPRYQ5W0U4 402 aa27.45■■□□□ 1.99
COL13A1-210ENST00000517713 ZNF296Q8WUU4 475 aaPredicted RBP27.45■■□□□ 1.99
COL13A1-210ENST00000517713 ANLNQ9NQW6 1124 aa27.45■■□□□ 1.99
COL13A1-210ENST00000517713 TMEM189-UBE2V1I3L0A0 370 aa27.45■■□□□ 1.98
COL13A1-210ENST00000517713 ELK3P41970 407 aa27.45■■□□□ 1.98
COL13A1-210ENST00000517713 OR1G1P47890 313 aa27.45■■□□□ 1.98
COL13A1-210ENST00000517713 ARL13BQ3SXY8 428 aa27.45■■□□□ 1.98
COL13A1-210ENST00000517713 C4orf50Q6ZRC1 276 aa27.45■■□□□ 1.98
COL13A1-210ENST00000517713 SRRM1Q8IYB3 904 aaKnown RBP27.45■■□□□ 1.98
COL13A1-210ENST00000517713 KCNK9Q9NPC2 374 aa27.45■■□□□ 1.98
COL13A1-210ENST00000517713 CHMP2BQ9UQN3 213 aa27.45■■□□□ 1.98
COL13A1-210ENST00000517713 NLRC5Q86WI3 1866 aa27.44■■□□□ 1.98
COL13A1-210ENST00000517713 ATP2A2P16615 1042 aaKnown RBP27.44■■□□□ 1.98
COL13A1-210ENST00000517713 GEMIN4P57678 1058 aaKnown RBP27.44■■□□□ 1.98
COL13A1-210ENST00000517713 VPS52Q8N1B4 723 aa27.44■■□□□ 1.98
COL13A1-210ENST00000517713 HTR3CQ8WXA8 447 aa27.44■■□□□ 1.98
COL13A1-210ENST00000517713 FAM193BQ96PV7 902 aaPredicted RBP27.44■■□□□ 1.98
COL13A1-210ENST00000517713 COLEC11Q9BWP8 271 aa27.44■■□□□ 1.98
COL13A1-210ENST00000517713 FETUBQ9UGM5 382 aa27.44■■□□□ 1.98
COL13A1-210ENST00000517713 TEX264Q9Y6I9 313 aa27.44■■□□□ 1.98
COL13A1-210ENST00000517713 RASA4BC9J798 803 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms